Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0769 and DvMF_0770 overlap by 4 nucleotides DvMF_0770 and DvMF_0771 are separated by 55 nucleotides DvMF_0771 and DvMF_0772 are separated by 71 nucleotides
DvMF_0769: DvMF_0769 - metal dependent phosphohydrolase (RefSeq), at 922,774 to 923,613
_0769
DvMF_0770: DvMF_0770 - hypothetical protein (RefSeq), at 923,610 to 924,104
_0770
DvMF_0771: DvMF_0771 - DNA protecting protein DprA (RefSeq), at 924,160 to 925,821
_0771
DvMF_0772: DvMF_0772 - tol-pal system protein YbgF (RefSeq), at 925,893 to 926,750
_0772
Position (kb) 924
925
926 Strain fitness (log2 ratio) -1
0
1 at 923.258 kb on + strand, within DvMF_0769 at 923.519 kb on - strand, within DvMF_0769 at 923.845 kb on - strand, within DvMF_0770 at 923.974 kb on + strand, within DvMF_0770 at 924.197 kb on + strand at 924.237 kb on + strand at 924.307 kb on + strand at 924.342 kb on + strand, within DvMF_0771 at 924.844 kb on + strand, within DvMF_0771 at 925.136 kb on + strand, within DvMF_0771 at 925.427 kb on - strand, within DvMF_0771 at 925.514 kb on + strand, within DvMF_0771 at 926.017 kb on + strand, within DvMF_0772 at 926.127 kb on - strand, within DvMF_0772 at 926.275 kb on + strand, within DvMF_0772 at 926.307 kb on - strand, within DvMF_0772 at 926.307 kb on - strand, within DvMF_0772 at 926.344 kb on + strand, within DvMF_0772 at 926.641 kb on + strand, within DvMF_0772 at 926.646 kb on + strand, within DvMF_0772 at 926.658 kb on + strand, within DvMF_0772 at 926.733 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 923,258 + DvMF_0769 0.58 -0.4 923,519 - DvMF_0769 0.89 -0.2 923,845 - DvMF_0770 0.47 -0.2 923,974 + DvMF_0770 0.74 -0.7 924,197 + +0.3 924,237 + -0.5 924,307 + -0.1 924,342 + DvMF_0771 0.11 +0.2 924,844 + DvMF_0771 0.41 +0.2 925,136 + DvMF_0771 0.59 -0.1 925,427 - DvMF_0771 0.76 -0.3 925,514 + DvMF_0771 0.81 -0.5 926,017 + DvMF_0772 0.14 -0.6 926,127 - DvMF_0772 0.27 -0.5 926,275 + DvMF_0772 0.45 +0.1 926,307 - DvMF_0772 0.48 -0.6 926,307 - DvMF_0772 0.48 -0.7 926,344 + DvMF_0772 0.53 -0.9 926,641 + DvMF_0772 0.87 -0.5 926,646 + DvMF_0772 0.88 -0.1 926,658 + DvMF_0772 0.89 -0.4 926,733 + -0.2
Or see this region's nucleotide sequence