Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0394 and DvMF_0395 are separated by 138 nucleotides DvMF_0395 and DvMF_0396 overlap by 8 nucleotides DvMF_0396 and DvMF_0397 overlap by 8 nucleotides
DvMF_0394: DvMF_0394 - protein of unknown function DUF1653 (RefSeq), at 465,303 to 465,671
_0394
DvMF_0395: DvMF_0395 - protein of unknown function DUF162 (RefSeq), at 465,810 to 466,466
_0395
DvMF_0396: DvMF_0396 - iron-sulfur cluster binding protein (RefSeq), at 466,459 to 467,886
_0396
DvMF_0397: DvMF_0397 - protein of unknown function DUF224 cysteine-rich region domain protein (RefSeq), at 467,879 to 468,640
_0397
Position (kb) 466
467
468 Strain fitness (log2 ratio) -1
0
1 at 465.467 kb on + strand, within DvMF_0394 at 465.475 kb on - strand, within DvMF_0394 at 465.485 kb on + strand, within DvMF_0394 at 465.493 kb on - strand, within DvMF_0394 at 465.844 kb on - strand at 465.883 kb on + strand, within DvMF_0395 at 465.898 kb on + strand, within DvMF_0395 at 466.227 kb on + strand, within DvMF_0395 at 466.456 kb on + strand at 466.464 kb on - strand at 466.545 kb on - strand at 466.567 kb on - strand at 466.599 kb on + strand at 466.688 kb on + strand, within DvMF_0396 at 466.909 kb on + strand, within DvMF_0396 at 467.170 kb on + strand, within DvMF_0396 at 467.356 kb on + strand, within DvMF_0396 at 467.496 kb on + strand, within DvMF_0396 at 467.596 kb on + strand, within DvMF_0396 at 467.668 kb on - strand, within DvMF_0396 at 467.843 kb on - strand at 467.881 kb on + strand at 468.414 kb on + strand, within DvMF_0397 at 468.519 kb on - strand, within DvMF_0397 at 468.530 kb on + strand, within DvMF_0397 at 468.593 kb on - strand at 468.803 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 465,467 + DvMF_0394 0.44 -0.3 465,475 - DvMF_0394 0.47 -0.2 465,485 + DvMF_0394 0.49 -0.2 465,493 - DvMF_0394 0.51 -1.0 465,844 - +0.4 465,883 + DvMF_0395 0.11 -0.5 465,898 + DvMF_0395 0.13 +1.5 466,227 + DvMF_0395 0.63 -0.1 466,456 + -0.9 466,464 - -0.6 466,545 - +0.1 466,567 - -0.9 466,599 + -0.5 466,688 + DvMF_0396 0.16 -0.3 466,909 + DvMF_0396 0.32 -0.5 467,170 + DvMF_0396 0.50 -0.6 467,356 + DvMF_0396 0.63 -1.4 467,496 + DvMF_0396 0.73 -1.1 467,596 + DvMF_0396 0.80 -1.0 467,668 - DvMF_0396 0.85 -0.3 467,843 - -0.7 467,881 + +0.0 468,414 + DvMF_0397 0.70 +0.4 468,519 - DvMF_0397 0.84 -0.9 468,530 + DvMF_0397 0.85 -0.3 468,593 - -0.3 468,803 - -0.1
Or see this region's nucleotide sequence