Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Dshi_4067: Dshi_4067 - hypothetical protein (RefSeq), at 42 to 731
_4067
Position (kb) 0
1 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 0.049 kb on + strand at 0.228 kb on - strand, within Dshi_4067 at 0.481 kb on - strand, within Dshi_4067 at 0.545 kb on - strand, within Dshi_4067 at 0.552 kb on - strand, within Dshi_4067 at 0.553 kb on - strand, within Dshi_4067 at 0.599 kb on - strand, within Dshi_4067 at 0.682 kb on - strand at 0.689 kb on - strand at 0.791 kb on - strand at 0.803 kb on + strand at 0.861 kb on + strand at 0.862 kb on - strand at 0.869 kb on - strand at 0.880 kb on + strand at 0.880 kb on + strand at 0.880 kb on + strand at 0.884 kb on + strand at 0.902 kb on + strand at 0.903 kb on - strand at 0.908 kb on - strand at 0.913 kb on - strand at 0.920 kb on - strand at 0.927 kb on - strand at 0.942 kb on - strand at 0.955 kb on + strand at 0.955 kb on + strand at 0.960 kb on + strand at 0.960 kb on + strand at 0.963 kb on + strand at 0.963 kb on - strand at 0.965 kb on + strand at 0.965 kb on + strand at 0.971 kb on + strand at 0.973 kb on - strand at 0.973 kb on - strand at 1.039 kb on + strand at 1.039 kb on + strand at 1.039 kb on + strand at 1.039 kb on + strand at 1.040 kb on - strand at 1.041 kb on - strand at 1.047 kb on - strand at 1.047 kb on - strand at 1.047 kb on - strand at 1.054 kb on + strand at 1.056 kb on - strand at 1.062 kb on + strand at 1.068 kb on - strand at 1.070 kb on - strand at 1.070 kb on - strand at 1.070 kb on - strand at 1.072 kb on - strand at 1.087 kb on + strand at 1.106 kb on + strand at 1.107 kb on - strand at 1.107 kb on - strand at 1.110 kb on - strand at 1.114 kb on + strand at 1.115 kb on - strand at 1.116 kb on + strand at 1.121 kb on + strand at 1.127 kb on + strand at 1.129 kb on + strand at 1.129 kb on + strand at 1.135 kb on - strand at 1.140 kb on + strand at 1.140 kb on + strand at 1.146 kb on + strand at 1.153 kb on + strand at 1.153 kb on - strand at 1.155 kb on + strand at 1.155 kb on + strand at 1.163 kb on - strand at 1.163 kb on - strand at 1.163 kb on - strand at 1.163 kb on - strand at 1.166 kb on - strand at 1.185 kb on + strand at 1.188 kb on - strand at 1.190 kb on + strand at 1.193 kb on - strand at 1.193 kb on - strand at 1.200 kb on + strand at 1.208 kb on - strand at 1.238 kb on + strand at 1.254 kb on + strand at 1.254 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on + strand at 1.256 kb on - strand at 1.257 kb on - strand at 1.262 kb on - strand at 1.262 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.264 kb on - strand at 1.278 kb on - strand at 1.280 kb on + strand at 1.282 kb on + strand at 1.283 kb on + strand at 1.285 kb on + strand at 1.285 kb on + strand at 1.285 kb on + strand at 1.285 kb on + strand at 1.285 kb on + strand at 1.288 kb on - strand at 1.291 kb on - strand at 1.293 kb on - strand at 1.293 kb on - strand at 1.293 kb on - strand at 1.293 kb on - strand at 1.293 kb on - strand at 1.298 kb on - strand at 1.298 kb on - strand at 1.317 kb on + strand at 1.333 kb on + strand at 1.341 kb on - strand at 1.356 kb on - strand at 1.384 kb on + strand at 1.389 kb on + strand at 1.394 kb on + strand at 1.394 kb on + strand at 1.394 kb on + strand at 1.397 kb on - strand at 1.397 kb on - strand at 1.402 kb on + strand at 1.402 kb on + strand at 1.412 kb on + strand at 1.412 kb on - strand at 1.417 kb on + strand at 1.425 kb on - strand at 1.435 kb on - strand at 1.451 kb on + strand at 1.459 kb on - strand at 1.459 kb on - strand at 1.481 kb on + strand at 1.489 kb on - strand at 1.489 kb on - strand at 1.489 kb on - strand at 1.494 kb on + strand at 1.495 kb on - strand at 1.495 kb on - strand at 1.495 kb on - strand at 1.517 kb on + strand at 1.517 kb on + strand at 1.519 kb on - strand at 1.525 kb on - strand at 1.527 kb on + strand at 1.527 kb on + strand at 1.527 kb on + strand at 1.527 kb on + strand at 1.527 kb on + strand at 1.527 kb on + strand at 1.527 kb on + strand at 1.527 kb on + strand at 1.530 kb on - strand at 1.532 kb on + strand at 1.532 kb on + strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.535 kb on - strand at 1.540 kb on - strand at 1.540 kb on - strand at 1.549 kb on + strand at 1.557 kb on + strand at 1.557 kb on + strand at 1.565 kb on - strand at 1.566 kb on - strand at 1.587 kb on - strand at 1.625 kb on - strand at 1.627 kb on + strand at 1.635 kb on - strand at 1.637 kb on + strand at 1.639 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.650 kb on + strand at 1.653 kb on - strand at 1.655 kb on + strand at 1.655 kb on - strand at 1.655 kb on - strand at 1.658 kb on - strand at 1.658 kb on - strand at 1.658 kb on - strand at 1.658 kb on - strand at 1.658 kb on - strand at 1.671 kb on + strand at 1.671 kb on + strand at 1.671 kb on + strand at 1.671 kb on + strand at 1.671 kb on + strand at 1.672 kb on + strand at 1.679 kb on - strand at 1.679 kb on - strand at 1.679 kb on - strand at 1.680 kb on - strand at 1.700 kb on - strand at 1.702 kb on - strand at 1.705 kb on - strand at 1.705 kb on - strand at 1.711 kb on + strand at 1.714 kb on - strand at 1.714 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0001 mg/ml remove 49 + -1.3 228 - Dshi_4067 0.27 -0.4 481 - Dshi_4067 0.64 -2.5 545 - Dshi_4067 0.73 -0.7 552 - Dshi_4067 0.74 -1.7 553 - Dshi_4067 0.74 -2.1 599 - Dshi_4067 0.81 -0.5 682 - +0.4 689 - -2.4 791 - -1.4 803 + -0.6 861 + -1.1 862 - -1.1 869 - -1.8 880 + -1.2 880 + +0.6 880 + -1.0 884 + -1.3 902 + +0.4 903 - -1.0 908 - -0.9 913 - -0.7 920 - -1.1 927 - +0.3 942 - -1.7 955 + -2.4 955 + -1.3 960 + -0.4 960 + -0.9 963 + -1.2 963 - -1.2 965 + -1.4 965 + -2.3 971 + -0.5 973 - -0.4 973 - -1.1 1,039 + +0.3 1,039 + +0.4 1,039 + -0.5 1,039 + -0.8 1,040 - -0.3 1,041 - -0.8 1,047 - -0.5 1,047 - -0.8 1,047 - +0.3 1,054 + -1.2 1,056 - -0.4 1,062 + -1.4 1,068 - -1.4 1,070 - +1.2 1,070 - -0.7 1,070 - -0.9 1,072 - +0.5 1,087 + -0.7 1,106 + +0.6 1,107 - +0.0 1,107 - -0.8 1,110 - -0.4 1,114 + -0.5 1,115 - -1.9 1,116 + -1.4 1,121 + -0.7 1,127 + -0.9 1,129 + -0.5 1,129 + -1.8 1,135 - -0.1 1,140 + -0.1 1,140 + -0.7 1,146 + -0.1 1,153 + +0.5 1,153 - -1.1 1,155 + -0.0 1,155 + -1.2 1,163 - -0.1 1,163 - -0.0 1,163 - -0.6 1,163 - -1.4 1,166 - -1.4 1,185 + +0.2 1,188 - -1.4 1,190 + -0.5 1,193 - -2.3 1,193 - -0.4 1,200 + -0.1 1,208 - +0.5 1,238 + -1.2 1,254 + -1.4 1,254 + -0.5 1,256 + +0.2 1,256 + -0.3 1,256 + -0.8 1,256 + +0.6 1,256 + +0.2 1,256 + -0.6 1,256 + +0.3 1,256 + -0.8 1,256 + +0.1 1,256 + +0.0 1,256 + -0.1 1,256 + -0.5 1,256 + -2.7 1,256 + -2.5 1,256 + +0.2 1,256 + -0.4 1,256 + -0.5 1,256 + +0.1 1,256 + +0.6 1,256 - -1.1 1,257 - -0.1 1,262 - -0.5 1,262 - -0.2 1,264 - -1.4 1,264 - -0.2 1,264 - +0.9 1,264 - -0.2 1,264 - -0.4 1,264 - -0.1 1,264 - -0.4 1,264 - -0.1 1,264 - +0.5 1,264 - -0.3 1,264 - +0.1 1,278 - -1.2 1,280 + -1.8 1,282 + -0.1 1,283 + -1.4 1,285 + -0.4 1,285 + -0.6 1,285 + +0.4 1,285 + -0.6 1,285 + -0.5 1,288 - -0.6 1,291 - -0.3 1,293 - -1.1 1,293 - +0.1 1,293 - -1.3 1,293 - -0.1 1,293 - -0.2 1,298 - +0.1 1,298 - -0.4 1,317 + -1.2 1,333 + -0.4 1,341 - -0.9 1,356 - -1.7 1,384 + -0.4 1,389 + +0.6 1,394 + -0.1 1,394 + -0.6 1,394 + -0.6 1,397 - +0.2 1,397 - -0.6 1,402 + -0.5 1,402 + -0.2 1,412 + -0.7 1,412 - +0.2 1,417 + +2.2 1,425 - -0.4 1,435 - +0.6 1,451 + -0.1 1,459 - +0.1 1,459 - +0.2 1,481 + +0.3 1,489 - +1.6 1,489 - +0.6 1,489 - -2.9 1,494 + -0.1 1,495 - -0.5 1,495 - -0.3 1,495 - -0.5 1,517 + +0.0 1,517 + -0.8 1,519 - -0.8 1,525 - +0.5 1,527 + +0.3 1,527 + -0.1 1,527 + +0.4 1,527 + -0.9 1,527 + +0.5 1,527 + +0.1 1,527 + -0.9 1,527 + -0.4 1,530 - +0.6 1,532 + -0.3 1,532 + +0.4 1,535 - -0.7 1,535 - -0.2 1,535 - -0.8 1,535 - -0.9 1,535 - -0.2 1,535 - -1.7 1,535 - -0.6 1,535 - -0.4 1,535 - -1.2 1,535 - -0.1 1,540 - +0.9 1,540 - -0.5 1,549 + -0.7 1,557 + -1.4 1,557 + -0.9 1,565 - -1.4 1,566 - +0.0 1,587 - +0.8 1,625 - -0.2 1,627 + -0.7 1,635 - +0.4 1,637 + +0.2 1,639 + -0.4 1,650 + +0.2 1,650 + -0.4 1,650 + -0.9 1,650 + -0.1 1,650 + -0.4 1,650 + -0.1 1,650 + +0.3 1,650 + -1.0 1,650 + -0.2 1,650 + -0.2 1,650 + -0.2 1,650 + -1.9 1,653 - +1.2 1,655 + -2.1 1,655 - -1.2 1,655 - -0.7 1,658 - -0.5 1,658 - -0.7 1,658 - -0.4 1,658 - -0.4 1,658 - +1.1 1,671 + -1.1 1,671 + +0.1 1,671 + -0.6 1,671 + -0.5 1,671 + -0.2 1,672 + -0.6 1,679 - +0.8 1,679 - -0.2 1,679 - -0.3 1,680 - -0.9 1,700 - +0.6 1,702 - -0.1 1,705 - -1.8 1,705 - +0.7 1,711 + +0.4 1,714 - +0.4 1,714 - +0.6
Or see this region's nucleotide sequence