Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3091 and Dshi_3092 overlap by 4 nucleotides Dshi_3092 and Dshi_3093 overlap by 4 nucleotides Dshi_3093 and Dshi_3094 overlap by 1 nucleotides
Dshi_3091: Dshi_3091 - aspartate carbamoyltransferase (RefSeq), at 3,260,134 to 3,261,084
_3091
Dshi_3092: Dshi_3092 - hypothetical protein (RefSeq), at 3,261,081 to 3,261,506
_3092
Dshi_3093: Dshi_3093 - hypothetical protein (RefSeq), at 3,261,503 to 3,262,081
_3093
Dshi_3094: Dshi_3094 - dihydroorotase, multifunctional complex type (RefSeq), at 3,262,081 to 3,263,379
_3094
Position (kb)
3261
3262 Strain fitness (log2 ratio)
-2
-1
0
1 at 3260.115 kb on + strand at 3260.115 kb on + strand at 3260.128 kb on - strand at 3260.267 kb on + strand, within Dshi_3091 at 3260.267 kb on + strand, within Dshi_3091 at 3260.353 kb on - strand, within Dshi_3091 at 3260.398 kb on + strand, within Dshi_3091 at 3260.659 kb on - strand, within Dshi_3091 at 3260.708 kb on + strand, within Dshi_3091 at 3260.746 kb on + strand, within Dshi_3091 at 3260.757 kb on + strand, within Dshi_3091 at 3260.772 kb on + strand, within Dshi_3091 at 3261.093 kb on - strand at 3261.237 kb on - strand, within Dshi_3092 at 3261.285 kb on - strand, within Dshi_3092 at 3261.359 kb on + strand, within Dshi_3092 at 3261.422 kb on + strand, within Dshi_3092 at 3261.589 kb on - strand, within Dshi_3093 at 3262.039 kb on - strand at 3262.209 kb on + strand at 3262.440 kb on + strand, within Dshi_3094
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0001 mg/ml remove 3,260,115 + -0.0 3,260,115 + -0.8 3,260,128 - +0.3 3,260,267 + Dshi_3091 0.14 -0.6 3,260,267 + Dshi_3091 0.14 -0.4 3,260,353 - Dshi_3091 0.23 -0.4 3,260,398 + Dshi_3091 0.28 +0.2 3,260,659 - Dshi_3091 0.55 -0.9 3,260,708 + Dshi_3091 0.60 -1.2 3,260,746 + Dshi_3091 0.64 +0.8 3,260,757 + Dshi_3091 0.66 -0.2 3,260,772 + Dshi_3091 0.67 +0.2 3,261,093 - -0.2 3,261,237 - Dshi_3092 0.37 -1.5 3,261,285 - Dshi_3092 0.48 -0.4 3,261,359 + Dshi_3092 0.65 -0.2 3,261,422 + Dshi_3092 0.80 -2.1 3,261,589 - Dshi_3093 0.15 -0.3 3,262,039 - -1.6 3,262,209 + -0.7 3,262,440 + Dshi_3094 0.28 -0.4
Or see this region's nucleotide sequence