Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_2775
Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cephalothin 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,936,387 | + | -1.2 | |||
2,936,390 | - | +0.3 | |||
2,936,477 | - | -0.0 | |||
2,937,328 | + | +1.4 | |||
2,937,381 | + | +0.0 | |||
2,937,538 | - | Dshi_2775 | 0.41 | -0.6 | |
2,937,572 | + | Dshi_2775 | 0.51 | -0.9 | |
2,937,572 | + | Dshi_2775 | 0.51 | -1.8 | |
2,937,582 | - | Dshi_2775 | 0.53 | +0.1 | |
2,937,628 | + | Dshi_2775 | 0.66 | -1.1 | |
2,937,688 | + | Dshi_2775 | 0.82 | +0.2 | |
2,937,731 | - | +0.2 | |||
2,937,807 | + | -0.9 | |||
2,937,898 | - | +0.2 | |||
2,938,079 | - | -1.3 | |||
2,938,148 | + | -0.4 | |||
2,938,186 | + | +0.2 | |||
2,938,191 | - | +0.7 | |||
2,938,247 | - | Dshi_2776 | 0.14 | -2.1 | |
2,938,254 | - | Dshi_2776 | 0.15 | -0.4 | |
2,938,280 | + | Dshi_2776 | 0.18 | -0.5 | |
2,938,312 | - | Dshi_2776 | 0.21 | +0.6 | |
2,938,687 | - | Dshi_2776 | 0.60 | -0.4 | |
2,938,687 | - | Dshi_2776 | 0.60 | -0.4 | |
2,938,689 | + | Dshi_2776 | 0.61 | -0.3 | |
2,938,698 | - | Dshi_2776 | 0.61 | +0.5 |
Or see this region's nucleotide sequence