Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1619

Experiment: m.b. Cephalothin 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.0001 mg/ml
1,683,392	+				-0.4
1,683,410	-				+0.2
1,683,433	+				-1.3
1,683,667	+		Dshi_1619	0.19	-1.9
1,683,707	-		Dshi_1619	0.21	-1.2
1,683,768	+		Dshi_1619	0.25	-1.7
1,683,794	+		Dshi_1619	0.27	-1.2
1,683,836	-		Dshi_1619	0.29	-0.8
1,683,865	+		Dshi_1619	0.31	-2.0
1,683,883	+		Dshi_1619	0.32	-1.4
1,684,025	+		Dshi_1619	0.41	-0.9
1,684,098	-		Dshi_1619	0.45	-1.2
1,684,172	-		Dshi_1619	0.50	-1.8
1,684,237	+		Dshi_1619	0.54	+0.2
1,684,245	-		Dshi_1619	0.55	-1.3
1,684,375	-		Dshi_1619	0.63	-0.6
1,684,375	-		Dshi_1619	0.63	-0.6
1,684,375	-		Dshi_1619	0.63	-1.3
1,684,382	-		Dshi_1619	0.63	-0.6
1,684,422	-		Dshi_1619	0.65	-2.1
1,684,437	+		Dshi_1619	0.66	-2.1
1,684,502	+		Dshi_1619	0.70	+0.0
1,684,520	-		Dshi_1619	0.72	-1.7
1,684,676	+		Dshi_1619	0.81	-2.4
1,684,684	-		Dshi_1619	0.82	-0.4
1,684,739	+		Dshi_1619	0.85	-1.0
1,684,808	+		Dshi_1619	0.89	-1.3
1,684,860	+				-1.3
1,684,860	+				-0.4
1,684,934	+				+0.6
1,684,934	+				-0.7
1,684,942	-				-0.5
1,684,951	+				-0.7
1,684,952	+				-0.9
1,684,959	+				-1.4
1,684,967	-				-0.8
1,684,987	-				-1.0
1,685,212	+				+0.0
1,685,224	+				+0.4
1,685,232	-				-1.0
1,685,232	-				-0.6
1,685,232	-				-0.8
1,685,238	+				-1.6
1,685,248	+				-3.0
1,685,248	+				+0.0
1,685,248	+				+1.0
1,685,256	-				-2.6
1,685,272	+				-2.0
1,685,283	+				-1.0
1,685,291	-				+0.0
1,685,343	-		Dshi_1620	0.12	+0.0
1,685,363	-		Dshi_1620	0.15	-1.3
1,685,368	+		Dshi_1620	0.16	-1.0
1,685,439	+		Dshi_1620	0.29	-1.0
1,685,457	+		Dshi_1620	0.32	-1.5
1,685,459	-		Dshi_1620	0.32	+0.3
1,685,459	-		Dshi_1620	0.32	-1.2
1,685,491	-		Dshi_1620	0.38	+0.6
1,685,877	+				+0.2