Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1545

Experiment: m.b. Cephalothin 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.0001 mg/ml
1,606,001	+		Dshi_1544	0.28	+0.8
1,606,359	+		Dshi_1544	0.74	-0.2
1,606,427	+		Dshi_1544	0.83	-0.6
1,606,435	-		Dshi_1544	0.84	-0.3
1,606,449	+		Dshi_1544	0.85	+0.2
1,606,465	-		Dshi_1544	0.87	-0.2
1,606,476	-		Dshi_1544	0.89	-0.2
1,606,484	+				+1.0
1,606,509	-				+0.6
1,606,718	-				-1.4
1,606,812	-				+0.1
1,606,814	-				+0.2
1,606,822	-				-0.3
1,606,966	+				-1.7
1,607,010	+				-1.8
1,607,029	+				-2.6
1,607,029	-				-2.4
1,607,039	-				-4.0
1,607,162	-		Dshi_1545	0.16	-1.3
1,607,176	+		Dshi_1545	0.17	-2.9
1,607,207	-		Dshi_1545	0.19	-2.5
1,607,219	+		Dshi_1545	0.19	-2.1
1,607,239	-		Dshi_1545	0.20	-1.5
1,607,451	-		Dshi_1545	0.32	-1.1
1,607,532	-		Dshi_1545	0.37	+0.3
1,607,679	+		Dshi_1545	0.45	-1.4
1,607,780	-		Dshi_1545	0.50	-0.7
1,607,872	-		Dshi_1545	0.55	-1.4
1,607,906	-		Dshi_1545	0.57	-1.5
1,607,911	-		Dshi_1545	0.57	-0.2
1,608,014	-		Dshi_1545	0.63	-0.7
1,608,043	+		Dshi_1545	0.65	-1.6
1,608,106	+		Dshi_1545	0.68	-2.0
1,608,175	+		Dshi_1545	0.72	-1.9
1,608,183	-		Dshi_1545	0.72	-1.3
1,608,209	+		Dshi_1545	0.74	-0.9
1,608,217	-		Dshi_1545	0.74	-0.7
1,608,339	+		Dshi_1545	0.81	-1.6
1,608,455	+		Dshi_1545	0.87	-2.9
1,608,539	-				-1.2
1,608,611	+				-2.1
1,608,658	+				-1.3
1,608,658	+				-3.1
1,608,658	+				-0.5
1,608,658	+				-0.3
1,608,658	+				-1.9
1,608,658	+				-0.5
1,608,658	+				-1.8
1,608,658	+				-0.3
1,608,666	-				-0.4
1,608,666	-				-2.0
1,608,666	-				-2.0
1,608,666	-				+0.4
1,608,666	-				-0.3
1,608,666	-				-1.4
1,608,666	-				-1.5
1,608,666	-				-2.3
1,608,666	-				-1.7
1,608,666	-				-1.0
1,608,666	-				+0.0
1,608,666	-				-1.8
1,608,666	-				-2.1
1,608,821	-				-0.1
1,609,211	-		Dshi_1546	0.39	-0.5
1,609,448	-		Dshi_1546	0.69	+0.2
1,609,666	-				+0.1