Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_1465
Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Cephalothin 0.0001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,519,518 | + | Dshi_1463 | 0.27 | +0.6 | |
1,520,030 | + | Dshi_1464 | 0.22 | -0.7 | |
1,520,117 | - | Dshi_1464 | 0.39 | +0.3 | |
1,520,197 | + | Dshi_1464 | 0.55 | -0.1 | |
1,520,205 | - | Dshi_1464 | 0.56 | -0.5 | |
1,520,619 | - | Dshi_1465 | 0.37 | -0.1 | |
1,520,714 | - | Dshi_1465 | 0.55 | -0.3 | |
1,520,718 | + | Dshi_1465 | 0.56 | +0.5 | |
1,520,742 | + | Dshi_1465 | 0.60 | +0.8 | |
1,520,742 | + | Dshi_1465 | 0.60 | +0.2 | |
1,520,750 | - | Dshi_1465 | 0.62 | +0.1 | |
1,520,771 | - | Dshi_1465 | 0.66 | +1.1 | |
1,520,862 | + | +0.5 | |||
1,520,867 | + | Dshi_1465 | 0.84 | -0.2 | |
1,520,870 | - | Dshi_1465 | 0.84 | +1.1 | |
1,520,875 | - | Dshi_1465 | 0.85 | -0.1 | |
1,520,899 | - | +0.2 |
Or see this region's nucleotide sequence