Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0793 and Dshi_0794 are separated by 145 nucleotides Dshi_0794 and Dshi_0795 are separated by 1 nucleotides Dshi_0795 and Dshi_0796 are separated by 190 nucleotides
Dshi_0793: Dshi_0793 - O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq), at 800,127 to 801,422
_0793
Dshi_0794: Dshi_0794 - Imidazoleglycerol-phosphate dehydratase (RefSeq), at 801,568 to 802,155
_0794
Dshi_0795: Dshi_0795 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (RefSeq), at 802,157 to 802,795
_0795
Dshi_0796: Dshi_0796 - ornithine carbamoyltransferase (RefSeq), at 802,986 to 803,912
_0796
Position (kb) 801
802
803 Strain fitness (log2 ratio) -1
0
1 at 800.586 kb on - strand, within Dshi_0793 at 800.648 kb on + strand, within Dshi_0793 at 800.843 kb on + strand, within Dshi_0793 at 800.843 kb on + strand, within Dshi_0793 at 800.851 kb on - strand, within Dshi_0793 at 800.851 kb on - strand, within Dshi_0793 at 800.854 kb on + strand, within Dshi_0793 at 801.082 kb on - strand, within Dshi_0793 at 801.115 kb on + strand, within Dshi_0793 at 801.144 kb on - strand, within Dshi_0793 at 801.149 kb on - strand, within Dshi_0793 at 801.224 kb on + strand, within Dshi_0793 at 801.231 kb on - strand, within Dshi_0793 at 801.306 kb on + strand at 801.314 kb on - strand at 801.381 kb on - strand at 801.397 kb on + strand at 801.425 kb on - strand at 802.803 kb on + strand at 802.826 kb on - strand at 802.878 kb on + strand at 803.137 kb on - strand, within Dshi_0796
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0001 mg/ml remove 800,586 - Dshi_0793 0.35 +0.6 800,648 + Dshi_0793 0.40 +0.2 800,843 + Dshi_0793 0.55 +0.1 800,843 + Dshi_0793 0.55 +0.5 800,851 - Dshi_0793 0.56 +0.5 800,851 - Dshi_0793 0.56 +0.3 800,854 + Dshi_0793 0.56 -0.3 801,082 - Dshi_0793 0.74 -0.3 801,115 + Dshi_0793 0.76 +0.2 801,144 - Dshi_0793 0.78 +1.0 801,149 - Dshi_0793 0.79 +0.3 801,224 + Dshi_0793 0.85 +1.7 801,231 - Dshi_0793 0.85 -0.3 801,306 + +0.1 801,314 - -0.4 801,381 - +0.4 801,397 + +0.1 801,425 - -0.1 802,803 + -1.0 802,826 - -1.6 802,878 + -0.5 803,137 - Dshi_0796 0.16 -0.8
Or see this region's nucleotide sequence