Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0600 and Dshi_0601 are separated by 253 nucleotides Dshi_0601 and Dshi_0602 are separated by 183 nucleotides
Dshi_0600: Dshi_0600 - MORN repeat-containing protein (RefSeq), at 592,010 to 593,416
_0600
Dshi_0601: Dshi_0601 - NAD+ synthetase (RefSeq), at 593,670 to 595,343
_0601
Dshi_0602: Dshi_0602 - protein of unknown function DUF1025 (RefSeq), at 595,527 to 595,928
_0602
Position (kb) 593
594
595
596 Strain fitness (log2 ratio) -2
-1
0
1
2 at 592.886 kb on + strand, within Dshi_0600 at 592.899 kb on + strand, within Dshi_0600 at 592.901 kb on + strand, within Dshi_0600 at 593.047 kb on - strand, within Dshi_0600 at 593.225 kb on - strand, within Dshi_0600 at 593.241 kb on - strand, within Dshi_0600 at 593.259 kb on + strand, within Dshi_0600 at 593.259 kb on + strand, within Dshi_0600 at 593.269 kb on + strand, within Dshi_0600 at 593.269 kb on + strand, within Dshi_0600 at 593.277 kb on - strand at 593.277 kb on - strand at 593.277 kb on - strand at 593.277 kb on - strand at 593.277 kb on - strand at 593.286 kb on - strand at 593.366 kb on - strand at 593.387 kb on + strand at 593.409 kb on - strand at 593.435 kb on - strand at 593.498 kb on + strand at 593.520 kb on + strand at 593.528 kb on - strand at 593.565 kb on + strand at 593.573 kb on - strand at 595.289 kb on + strand at 595.504 kb on + strand at 595.519 kb on + strand at 595.529 kb on + strand at 595.625 kb on + strand, within Dshi_0602 at 595.625 kb on + strand, within Dshi_0602 at 595.630 kb on + strand, within Dshi_0602 at 595.633 kb on - strand, within Dshi_0602 at 595.633 kb on - strand, within Dshi_0602 at 595.633 kb on - strand, within Dshi_0602 at 595.633 kb on - strand, within Dshi_0602 at 595.692 kb on - strand, within Dshi_0602 at 595.697 kb on - strand, within Dshi_0602 at 595.739 kb on + strand, within Dshi_0602 at 595.743 kb on - strand, within Dshi_0602 at 595.747 kb on - strand, within Dshi_0602 at 595.752 kb on - strand, within Dshi_0602 at 595.794 kb on - strand, within Dshi_0602 at 595.797 kb on - strand, within Dshi_0602 at 595.801 kb on + strand, within Dshi_0602 at 595.843 kb on + strand, within Dshi_0602 at 595.884 kb on + strand, within Dshi_0602 at 595.895 kb on + strand at 595.914 kb on - strand at 595.958 kb on + strand at 595.978 kb on + strand at 596.009 kb on + strand at 596.009 kb on + strand at 596.009 kb on + strand at 596.009 kb on + strand at 596.009 kb on + strand at 596.014 kb on + strand at 596.032 kb on - strand at 596.065 kb on + strand at 596.073 kb on + strand at 596.073 kb on - strand at 596.081 kb on - strand at 596.081 kb on - strand at 596.090 kb on + strand at 596.098 kb on - strand at 596.119 kb on - strand at 596.122 kb on - strand at 596.123 kb on + strand at 596.123 kb on + strand at 596.123 kb on + strand at 596.123 kb on + strand at 596.124 kb on - strand at 596.131 kb on - strand at 596.131 kb on - strand at 596.131 kb on - strand at 596.131 kb on - strand at 596.141 kb on - strand at 596.172 kb on - strand at 596.175 kb on - strand at 596.182 kb on - strand at 596.188 kb on + strand at 596.191 kb on - strand at 596.191 kb on - strand at 596.191 kb on - strand at 596.191 kb on - strand at 596.198 kb on + strand at 596.198 kb on + strand at 596.198 kb on + strand at 596.198 kb on + strand at 596.206 kb on - strand at 596.206 kb on - strand at 596.206 kb on - strand at 596.206 kb on - strand at 596.208 kb on - strand at 596.208 kb on - strand at 596.212 kb on + strand at 596.212 kb on + strand at 596.212 kb on + strand at 596.212 kb on + strand at 596.215 kb on - strand at 596.215 kb on - strand at 596.220 kb on + strand at 596.220 kb on - strand at 596.220 kb on - strand at 596.220 kb on - strand at 596.220 kb on - strand at 596.235 kb on - strand at 596.257 kb on + strand at 596.268 kb on + strand at 596.270 kb on + strand at 596.270 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.275 kb on + strand at 596.278 kb on - strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on + strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.283 kb on - strand at 596.288 kb on - strand at 596.288 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.291 kb on - strand at 596.292 kb on - strand at 596.292 kb on - strand at 596.292 kb on - strand at 596.293 kb on + strand at 596.294 kb on + strand at 596.302 kb on + strand at 596.302 kb on - strand at 596.302 kb on - strand at 596.307 kb on + strand at 596.309 kb on + strand at 596.309 kb on + strand at 596.309 kb on + strand at 596.309 kb on + strand at 596.309 kb on + strand at 596.310 kb on - strand at 596.316 kb on - strand at 596.316 kb on - strand at 596.316 kb on - strand at 596.316 kb on - strand at 596.317 kb on - strand at 596.317 kb on - strand at 596.317 kb on - strand at 596.317 kb on - strand at 596.317 kb on - strand at 596.317 kb on - strand at 596.317 kb on - strand at 596.317 kb on - strand at 596.319 kb on + strand at 596.319 kb on + strand at 596.319 kb on + strand at 596.319 kb on + strand at 596.319 kb on + strand at 596.327 kb on - strand at 596.327 kb on - strand at 596.327 kb on - strand at 596.327 kb on - strand at 596.327 kb on - strand at 596.327 kb on - strand at 596.329 kb on + strand at 596.337 kb on - strand at 596.337 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0001 mg/ml remove 592,886 + Dshi_0600 0.62 +0.3 592,899 + Dshi_0600 0.63 +0.7 592,901 + Dshi_0600 0.63 -0.6 593,047 - Dshi_0600 0.74 -1.2 593,225 - Dshi_0600 0.86 -1.7 593,241 - Dshi_0600 0.87 -0.3 593,259 + Dshi_0600 0.89 -0.7 593,259 + Dshi_0600 0.89 +0.1 593,269 + Dshi_0600 0.89 +0.1 593,269 + Dshi_0600 0.89 -1.7 593,277 - -0.3 593,277 - -0.2 593,277 - -1.7 593,277 - -0.8 593,277 - +0.4 593,286 - +1.3 593,366 - -2.1 593,387 + -0.7 593,409 - -0.5 593,435 - -0.9 593,498 + -0.4 593,520 + +0.8 593,528 - -0.9 593,565 + +2.1 593,573 - +1.3 595,289 + +0.3 595,504 + -0.1 595,519 + +1.1 595,529 + +2.6 595,625 + Dshi_0602 0.24 -0.3 595,625 + Dshi_0602 0.24 +0.0 595,630 + Dshi_0602 0.26 +1.1 595,633 - Dshi_0602 0.26 +0.9 595,633 - Dshi_0602 0.26 -0.7 595,633 - Dshi_0602 0.26 -0.9 595,633 - Dshi_0602 0.26 -1.6 595,692 - Dshi_0602 0.41 +0.7 595,697 - Dshi_0602 0.42 -0.3 595,739 + Dshi_0602 0.53 +0.5 595,743 - Dshi_0602 0.54 +0.6 595,747 - Dshi_0602 0.55 -0.0 595,752 - Dshi_0602 0.56 +1.1 595,794 - Dshi_0602 0.66 +0.2 595,797 - Dshi_0602 0.67 -0.2 595,801 + Dshi_0602 0.68 +0.4 595,843 + Dshi_0602 0.79 +0.0 595,884 + Dshi_0602 0.89 -0.3 595,895 + -0.7 595,914 - +0.6 595,958 + -0.2 595,978 + +0.2 596,009 + -0.2 596,009 + +0.3 596,009 + +0.5 596,009 + -0.5 596,009 + -0.0 596,014 + -0.7 596,032 - -1.0 596,065 + +1.0 596,073 + +0.4 596,073 - +0.5 596,081 - +0.5 596,081 - -0.2 596,090 + +0.1 596,098 - -0.5 596,119 - -0.2 596,122 - +1.3 596,123 + -1.7 596,123 + +0.8 596,123 + +0.4 596,123 + +0.0 596,124 - +0.2 596,131 - -1.1 596,131 - +0.0 596,131 - +0.3 596,131 - +0.4 596,141 - -0.7 596,172 - -0.4 596,175 - -0.6 596,182 - -0.9 596,188 + -1.0 596,191 - -0.0 596,191 - -0.2 596,191 - -0.9 596,191 - -0.6 596,198 + +0.8 596,198 + -0.3 596,198 + +0.7 596,198 + +0.1 596,206 - -0.2 596,206 - -0.9 596,206 - -1.5 596,206 - -0.1 596,208 - -0.0 596,208 - +0.0 596,212 + +0.9 596,212 + -0.6 596,212 + -0.1 596,212 + -1.2 596,215 - -0.3 596,215 - +0.1 596,220 + +0.5 596,220 - -0.3 596,220 - +1.1 596,220 - -0.6 596,220 - -0.5 596,235 - -1.0 596,257 + +1.3 596,268 + +0.0 596,270 + -0.5 596,270 + +0.4 596,275 + -0.3 596,275 + -0.9 596,275 + -0.5 596,275 + -0.8 596,275 + -0.6 596,275 + -0.9 596,275 + +0.8 596,275 + +0.5 596,275 + +0.1 596,275 + +0.3 596,275 + +0.4 596,278 - +0.9 596,283 + -0.3 596,283 + -0.3 596,283 + +0.2 596,283 + +0.6 596,283 + +0.0 596,283 + -0.4 596,283 + -0.4 596,283 + +0.2 596,283 + +0.4 596,283 + -1.3 596,283 - +0.3 596,283 - +0.0 596,283 - +0.8 596,283 - +0.5 596,283 - -0.7 596,283 - -0.8 596,283 - +0.7 596,283 - -0.3 596,283 - -0.8 596,283 - -0.5 596,283 - +0.3 596,283 - +0.3 596,283 - -1.2 596,283 - -0.2 596,283 - -0.7 596,283 - +0.7 596,283 - +0.3 596,283 - -0.1 596,288 - +0.3 596,288 - -0.3 596,291 - -0.5 596,291 - -0.9 596,291 - +0.4 596,291 - +0.0 596,291 - -0.6 596,291 - +1.6 596,291 - -0.6 596,291 - +0.8 596,291 - -0.6 596,291 - -1.9 596,291 - +0.5 596,291 - -2.0 596,291 - +0.2 596,291 - -1.3 596,291 - -1.0 596,291 - -0.1 596,291 - -2.2 596,291 - +0.0 596,292 - -0.3 596,292 - -0.2 596,292 - +0.6 596,293 + -0.7 596,294 + -0.2 596,302 + +0.1 596,302 - -0.1 596,302 - -0.6 596,307 + +0.4 596,309 + -0.4 596,309 + +0.4 596,309 + -0.5 596,309 + +0.3 596,309 + -0.5 596,310 - -0.1 596,316 - +0.0 596,316 - -0.6 596,316 - -0.1 596,316 - +0.7 596,317 - -1.1 596,317 - +0.4 596,317 - -0.4 596,317 - +0.4 596,317 - +0.4 596,317 - +1.3 596,317 - -1.2 596,317 - +0.3 596,319 + +0.9 596,319 + +0.4 596,319 + -0.1 596,319 + +0.1 596,319 + +0.7 596,327 - -1.3 596,327 - +0.0 596,327 - -0.0 596,327 - -0.4 596,327 - -0.4 596,327 - -0.3 596,329 + +0.6 596,337 - -0.5 596,337 - +1.6
Or see this region's nucleotide sequence