Experiment: m.b. Cephalothin 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0367 and Dshi_0368 overlap by 4 nucleotides Dshi_0368 and Dshi_0369 are separated by 17 nucleotides
Dshi_0367: Dshi_0367 - amine oxidase (RefSeq), at 350,649 to 351,953
_0367
Dshi_0368: Dshi_0368 - protein of unknown function DUF1365 (RefSeq), at 351,950 to 352,708
_0368
Dshi_0369: Dshi_0369 - sodium:galactoside symporter family protein, putative (RefSeq), at 352,726 to 353,964
_0369
Position (kb) 351
352
353 Strain fitness (log2 ratio) -2
-1
0
1 at 350.990 kb on - strand, within Dshi_0367 at 351.006 kb on - strand, within Dshi_0367 at 351.064 kb on + strand, within Dshi_0367 at 351.066 kb on + strand, within Dshi_0367 at 351.113 kb on - strand, within Dshi_0367 at 351.227 kb on - strand, within Dshi_0367 at 351.256 kb on + strand, within Dshi_0367 at 351.269 kb on + strand, within Dshi_0367 at 351.348 kb on - strand, within Dshi_0367 at 351.462 kb on + strand, within Dshi_0367 at 351.522 kb on + strand, within Dshi_0367 at 351.526 kb on + strand, within Dshi_0367 at 351.554 kb on - strand, within Dshi_0367 at 351.560 kb on + strand, within Dshi_0367 at 351.587 kb on + strand, within Dshi_0367 at 351.587 kb on + strand, within Dshi_0367 at 351.595 kb on - strand, within Dshi_0367 at 351.595 kb on - strand, within Dshi_0367 at 351.597 kb on + strand, within Dshi_0367 at 351.597 kb on + strand, within Dshi_0367 at 351.642 kb on + strand, within Dshi_0367 at 351.712 kb on - strand, within Dshi_0367 at 351.768 kb on + strand, within Dshi_0367 at 351.876 kb on + strand at 351.884 kb on - strand at 351.894 kb on - strand at 351.992 kb on + strand at 352.139 kb on + strand, within Dshi_0368 at 352.263 kb on + strand, within Dshi_0368 at 352.271 kb on - strand, within Dshi_0368 at 352.400 kb on - strand, within Dshi_0368 at 352.454 kb on - strand, within Dshi_0368 at 352.454 kb on - strand, within Dshi_0368 at 352.509 kb on - strand, within Dshi_0368 at 352.570 kb on + strand, within Dshi_0368 at 352.653 kb on - strand at 352.674 kb on + strand at 352.706 kb on - strand at 352.833 kb on + strand at 352.833 kb on + strand at 352.835 kb on + strand at 352.849 kb on - strand at 353.049 kb on - strand, within Dshi_0369 at 353.050 kb on - strand, within Dshi_0369 at 353.054 kb on - strand, within Dshi_0369 at 353.137 kb on - strand, within Dshi_0369 at 353.233 kb on + strand, within Dshi_0369 at 353.280 kb on + strand, within Dshi_0369 at 353.301 kb on + strand, within Dshi_0369 at 353.336 kb on - strand, within Dshi_0369 at 353.402 kb on - strand, within Dshi_0369 at 353.407 kb on - strand, within Dshi_0369 at 353.523 kb on + strand, within Dshi_0369 at 353.524 kb on + strand, within Dshi_0369 at 353.532 kb on - strand, within Dshi_0369 at 353.611 kb on + strand, within Dshi_0369 at 353.683 kb on + strand, within Dshi_0369
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cephalothin 0.0001 mg/ml remove 350,990 - Dshi_0367 0.26 +1.4 351,006 - Dshi_0367 0.27 +1.0 351,064 + Dshi_0367 0.32 -1.2 351,066 + Dshi_0367 0.32 -0.2 351,113 - Dshi_0367 0.36 +0.6 351,227 - Dshi_0367 0.44 -0.2 351,256 + Dshi_0367 0.47 +1.2 351,269 + Dshi_0367 0.48 +1.6 351,348 - Dshi_0367 0.54 +0.3 351,462 + Dshi_0367 0.62 +1.5 351,522 + Dshi_0367 0.67 +0.7 351,526 + Dshi_0367 0.67 -0.2 351,554 - Dshi_0367 0.69 -0.0 351,560 + Dshi_0367 0.70 +0.4 351,587 + Dshi_0367 0.72 +0.1 351,587 + Dshi_0367 0.72 -0.2 351,595 - Dshi_0367 0.72 +0.0 351,595 - Dshi_0367 0.72 +0.9 351,597 + Dshi_0367 0.73 +0.8 351,597 + Dshi_0367 0.73 -1.7 351,642 + Dshi_0367 0.76 -0.7 351,712 - Dshi_0367 0.81 -0.5 351,768 + Dshi_0367 0.86 -0.2 351,876 + +0.7 351,884 - +0.9 351,894 - +0.4 351,992 + -0.3 352,139 + Dshi_0368 0.25 +1.7 352,263 + Dshi_0368 0.41 -0.0 352,271 - Dshi_0368 0.42 +0.3 352,400 - Dshi_0368 0.59 +0.7 352,454 - Dshi_0368 0.66 -0.2 352,454 - Dshi_0368 0.66 +0.1 352,509 - Dshi_0368 0.74 -1.0 352,570 + Dshi_0368 0.82 +0.5 352,653 - +0.6 352,674 + +0.1 352,706 - -0.2 352,833 + -0.2 352,833 + -0.1 352,835 + +0.8 352,849 - +1.6 353,049 - Dshi_0369 0.26 -0.4 353,050 - Dshi_0369 0.26 -0.2 353,054 - Dshi_0369 0.26 +0.5 353,137 - Dshi_0369 0.33 -0.4 353,233 + Dshi_0369 0.41 -2.1 353,280 + Dshi_0369 0.45 -0.6 353,301 + Dshi_0369 0.46 +0.1 353,336 - Dshi_0369 0.49 -0.1 353,402 - Dshi_0369 0.55 +0.1 353,407 - Dshi_0369 0.55 -0.6 353,523 + Dshi_0369 0.64 -0.1 353,524 + Dshi_0369 0.64 +0.6 353,532 - Dshi_0369 0.65 +1.2 353,611 + Dshi_0369 0.71 -0.0 353,683 + Dshi_0369 0.77 -1.0
Or see this region's nucleotide sequence