Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0140

Experiment: m.b. Cephalothin 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Cephalothin 0.0001 mg/ml
138,248	+		Dshi_0139	0.61	+0.6
138,252	-		Dshi_0139	0.61	+0.3
138,257	+		Dshi_0139	0.62	-0.4
138,303	+		Dshi_0139	0.64	+0.7
138,386	+		Dshi_0139	0.69	+0.5
138,394	+		Dshi_0139	0.69	+0.2
138,394	-		Dshi_0139	0.69	+1.8
138,417	+		Dshi_0139	0.71	+0.6
138,437	+		Dshi_0139	0.72	+0.5
138,455	-		Dshi_0139	0.73	-0.8
138,502	+		Dshi_0139	0.76	+0.8
138,541	+		Dshi_0139	0.78	-0.1
138,572	+		Dshi_0139	0.80	-1.4
138,592	-		Dshi_0139	0.81	-0.3
138,630	-		Dshi_0139	0.83	-0.0
138,630	-		Dshi_0139	0.83	+0.4
138,740	-		Dshi_0139	0.89	-0.2
138,742	+		Dshi_0139	0.89	+0.9
138,755	+				+0.2
138,755	+				-0.9
138,763	-				-1.2
138,776	-				+0.6
138,791	-				-0.5
138,902	+				+0.8
138,932	+				+0.4
138,947	+				+0.1
138,966	+				-0.5
139,048	-				+0.3
139,048	-				-0.7
139,058	-				-0.4
139,064	-				-0.0
139,070	+				-0.9
139,070	+				-0.2
139,078	-				+0.1
139,128	-				-0.7
139,130	-				-0.8
139,137	-				-0.3
139,149	+				-0.3
139,157	-				-0.4
139,195	+		Dshi_0140	0.12	+0.0
139,249	-		Dshi_0140	0.18	-0.8
139,308	+		Dshi_0140	0.26	-0.9
139,330	+		Dshi_0140	0.28	-1.5
139,330	+		Dshi_0140	0.28	-0.2
139,357	+		Dshi_0140	0.32	-0.4
139,365	-		Dshi_0140	0.32	-0.2
139,464	+		Dshi_0140	0.45	-0.9
139,682	-		Dshi_0140	0.71	-2.1
139,682	-		Dshi_0140	0.71	+0.3
139,709	-				+0.1
139,843	+				+0.3
139,851	-				+0.2
139,880	+				-0.2
139,885	+				+0.2
139,976	+		Dshi_0141	0.11	-0.6
139,984	-		Dshi_0141	0.12	-0.1
139,994	-		Dshi_0141	0.14	-0.4
139,994	-		Dshi_0141	0.14	-0.1
140,210	+		Dshi_0141	0.48	+1.4
140,251	-		Dshi_0141	0.55	-0.1
140,255	+		Dshi_0141	0.56	-0.2
140,433	-		Dshi_0141	0.84	-0.4
140,546	-				-0.0
140,691	+				-1.8
140,834	-				-0.6