Experiment: Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUAs01 and DVUA0146 are separated by 847 nucleotides DVUA0146 and DVUA0147 are separated by 578 nucleotides
DVUA0145: DVUA0145 - conserved domain protein (TIGR), at 187,348 to 191,274
DVUA0145
DVUAs01: DVUAs01 - no description, at 190,003 to 190,437
DVUAs01
DVUA0146: DVUA0146 - hypothetical protein (TIGR), at 191,285 to 191,755
DVUA0146
DVUA0147: DVUA0147 - conserved hypothetical protein (TIGR), at 192,334 to 193,575
DVUA0147
Position (kb) 191
192 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 190.299 kb on + strand at 190.307 kb on - strand at 190.335 kb on - strand at 190.340 kb on - strand at 190.341 kb on - strand at 190.366 kb on - strand at 190.398 kb on + strand at 190.404 kb on - strand at 190.443 kb on + strand, within DVUA0145 at 190.461 kb on - strand, within DVUA0145 at 190.539 kb on - strand, within DVUA0145 at 190.623 kb on - strand, within DVUA0145 at 190.627 kb on + strand, within DVUA0145 at 190.666 kb on + strand, within DVUA0145 at 190.674 kb on - strand, within DVUA0145 at 190.679 kb on - strand, within DVUA0145 at 190.689 kb on - strand, within DVUA0145 at 190.694 kb on - strand, within DVUA0145 at 190.796 kb on - strand, within DVUA0145 at 190.809 kb on + strand, within DVUA0145 at 190.812 kb on - strand, within DVUA0145 at 190.865 kb on - strand, within DVUA0145 at 190.865 kb on - strand, within DVUA0145 at 190.876 kb on - strand, within DVUA0145 at 190.963 kb on + strand at 190.997 kb on + strand at 191.005 kb on - strand at 191.005 kb on - strand at 191.067 kb on + strand at 191.107 kb on + strand at 191.107 kb on + strand at 191.133 kb on - strand at 191.202 kb on + strand at 191.284 kb on - strand at 191.333 kb on + strand, within DVUA0146 at 191.347 kb on - strand, within DVUA0146 at 191.399 kb on - strand, within DVUA0146 at 191.399 kb on - strand, within DVUA0146 at 191.458 kb on + strand, within DVUA0146 at 191.541 kb on - strand, within DVUA0146 at 191.599 kb on - strand, within DVUA0146 at 191.674 kb on + strand, within DVUA0146 at 191.682 kb on - strand, within DVUA0146 at 191.731 kb on + strand at 191.744 kb on + strand at 191.776 kb on + strand at 191.844 kb on + strand at 191.844 kb on + strand at 191.862 kb on - strand at 191.886 kb on - strand at 191.891 kb on + strand at 191.926 kb on + strand at 191.937 kb on - strand at 191.946 kb on + strand at 191.948 kb on - strand at 192.005 kb on + strand at 192.127 kb on + strand at 192.140 kb on + strand at 192.185 kb on - strand at 192.214 kb on + strand at 192.216 kb on + strand at 192.254 kb on + strand at 192.266 kb on + strand at 192.274 kb on - strand at 192.289 kb on + strand at 192.289 kb on + strand at 192.372 kb on - strand at 192.487 kb on + strand, within DVUA0147 at 192.487 kb on + strand, within DVUA0147 at 192.495 kb on - strand, within DVUA0147 at 192.495 kb on - strand, within DVUA0147 at 192.495 kb on - strand, within DVUA0147 at 192.495 kb on - strand, within DVUA0147 at 192.602 kb on + strand, within DVUA0147 at 192.620 kb on - strand, within DVUA0147 at 192.638 kb on + strand, within DVUA0147 at 192.710 kb on + strand, within DVUA0147 at 192.725 kb on - strand, within DVUA0147
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract remove 190,299 + -0.8 190,307 - +0.1 190,335 - -0.1 190,340 - -0.2 190,341 - -0.7 190,366 - -0.6 190,398 + -1.3 190,404 - -0.5 190,443 + DVUA0145 0.79 +1.1 190,461 - DVUA0145 0.79 -0.7 190,539 - DVUA0145 0.81 -1.0 190,623 - DVUA0145 0.83 -0.3 190,627 + DVUA0145 0.83 +0.7 190,666 + DVUA0145 0.84 -1.8 190,674 - DVUA0145 0.85 +0.1 190,679 - DVUA0145 0.85 +0.7 190,689 - DVUA0145 0.85 +0.2 190,694 - DVUA0145 0.85 +0.7 190,796 - DVUA0145 0.88 -1.6 190,809 + DVUA0145 0.88 -0.7 190,812 - DVUA0145 0.88 -0.3 190,865 - DVUA0145 0.90 -0.1 190,865 - DVUA0145 0.90 -0.8 190,876 - DVUA0145 0.90 -0.0 190,963 + -0.0 190,997 + -0.2 191,005 - -0.6 191,005 - +0.7 191,067 + -0.7 191,107 + -0.8 191,107 + -0.6 191,133 - -0.3 191,202 + +0.7 191,284 - -0.3 191,333 + DVUA0146 0.10 -0.6 191,347 - DVUA0146 0.13 -0.0 191,399 - DVUA0146 0.24 -0.5 191,399 - DVUA0146 0.24 +0.5 191,458 + DVUA0146 0.37 +0.8 191,541 - DVUA0146 0.54 -0.4 191,599 - DVUA0146 0.67 +0.7 191,674 + DVUA0146 0.83 +0.4 191,682 - DVUA0146 0.84 -2.8 191,731 + -0.3 191,744 + -0.1 191,776 + +0.7 191,844 + -0.3 191,844 + -0.0 191,862 - -0.2 191,886 - -0.2 191,891 + -0.6 191,926 + +0.4 191,937 - -0.1 191,946 + -0.3 191,948 - -0.2 192,005 + -0.3 192,127 + -0.6 192,140 + +0.7 192,185 - -0.5 192,214 + -0.3 192,216 + +0.8 192,254 + -0.3 192,266 + -0.1 192,274 - -0.8 192,289 + -0.6 192,289 + -0.2 192,372 - +1.4 192,487 + DVUA0147 0.12 +0.3 192,487 + DVUA0147 0.12 -0.4 192,495 - DVUA0147 0.13 -0.6 192,495 - DVUA0147 0.13 +0.6 192,495 - DVUA0147 0.13 -0.7 192,495 - DVUA0147 0.13 +1.7 192,602 + DVUA0147 0.22 -0.5 192,620 - DVUA0147 0.23 -0.1 192,638 + DVUA0147 0.24 -0.0 192,710 + DVUA0147 0.30 -0.6 192,725 - DVUA0147 0.31 -0.2
Or see this region's nucleotide sequence