Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0320

Experiment: Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU0319 and DVU0320 are separated by 131 nucleotidesDVU0320 and DVU0321 are separated by 316 nucleotides DVU0319: DVU0319 - NAD-dependent epimerase/dehydratase family protein (TIGR), at 362,485 to 363,510 DVU0319 DVU0320: DVU0320 - conserved hypothetical protein (TIGR), at 363,642 to 363,902 DVU0320 DVU0321: DVU0321 - transcriptional activator, putative, Baf family (TIGR), at 364,219 to 365,007 DVU0321 Position (kb) 363 364Strain fitness (log2 ratio) -1 0 1at 363.571 kb on + strandat 363.579 kb on - strandat 363.587 kb on + strandat 363.725 kb on - strand, within DVU0320at 363.735 kb on + strand, within DVU0320at 363.780 kb on + strand, within DVU0320at 363.783 kb on - strand, within DVU0320at 363.794 kb on + strand, within DVU0320at 363.843 kb on - strand, within DVU0320at 363.845 kb on - strand, within DVU0320at 363.845 kb on - strand, within DVU0320at 364.008 kb on + strandat 364.008 kb on + strandat 364.046 kb on + strandat 364.062 kb on - strandat 364.080 kb on - strandat 364.095 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract
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363,571 + -0.1
363,579 - -0.9
363,587 + -0.2
363,725 - DVU0320 0.32 +0.7
363,735 + DVU0320 0.36 +1.7
363,780 + DVU0320 0.53 +0.1
363,783 - DVU0320 0.54 +0.2
363,794 + DVU0320 0.58 +0.4
363,843 - DVU0320 0.77 +0.0
363,845 - DVU0320 0.78 +0.2
363,845 - DVU0320 0.78 +0.7
364,008 + +0.1
364,008 + +0.4
364,046 + -0.4
364,062 - -0.2
364,080 - -0.3
364,095 + -0.0

Or see this region's nucleotide sequence