Experiment: Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2860 and DVU2861 overlap by 17 nucleotides DVU2861 and DVU2862 overlap by 4 nucleotides DVU2862 and DVU2863 overlap by 4 nucleotides DVU2863 and DVU2864 are separated by 2 nucleotides DVU2864 and DVU2865 are separated by 16 nucleotides DVU2865 and DVU2866 are separated by 17 nucleotides
DVU2860: DVU2860 - conserved hypothetical protein (TIGR), at 2,960,258 to 2,960,449
DVU2860
DVU2861: DVU2861 - hypothetical protein (TIGR), at 2,960,433 to 2,960,990
DVU2861
DVU2862: DVU2862 - hypothetical protein (TIGR), at 2,960,987 to 2,961,313
DVU2862
DVU2863: DVU2863 - hypothetical protein (TIGR), at 2,961,310 to 2,961,903
DVU2863
DVU2864: DVU2864 - hypothetical protein (TIGR), at 2,961,906 to 2,962,049
DVU2864
DVU2865: DVU2865 - lipoprotein, putative (TIGR), at 2,962,066 to 2,962,476
DVU2865
DVU2866: DVU2866 - conserved hypothetical protein (TIGR), at 2,962,494 to 2,963,042
DVU2866
Position (kb)
2961
2962 Strain fitness (log2 ratio)
-1
0
1 at 2960.703 kb on + strand, within DVU2861 at 2960.925 kb on - strand, within DVU2861 at 2960.925 kb on - strand, within DVU2861 at 2961.473 kb on - strand, within DVU2863 at 2961.473 kb on - strand, within DVU2863 at 2961.978 kb on + strand, within DVU2864 at 2961.978 kb on + strand, within DVU2864 at 2961.993 kb on + strand, within DVU2864 at 2962.226 kb on + strand, within DVU2865 at 2962.499 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract remove 2,960,703 + DVU2861 0.48 -0.4 2,960,925 - DVU2861 0.88 -0.8 2,960,925 - DVU2861 0.88 +0.6 2,961,473 - DVU2863 0.27 +0.2 2,961,473 - DVU2863 0.27 +1.4 2,961,978 + DVU2864 0.50 +0.1 2,961,978 + DVU2864 0.50 -0.0 2,961,993 + DVU2864 0.60 -0.2 2,962,226 + DVU2865 0.39 -0.8 2,962,499 - -0.5
Or see this region's nucleotide sequence