Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2498

Experiment: Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2496 and DVU2497 are separated by 235 nucleotidesDVU2497 and DVU2498 are separated by 24 nucleotidesDVU2498 and ftsZ are separated by 228 nucleotides DVU2496: DVU2496 - lipoprotein, putative (TIGR), at 2,607,928 to 2,608,380 DVU2496 DVU2497: DVU2497 - lipoprotein, putative (TIGR), at 2,608,616 to 2,609,350 DVU2497 DVU2498: DVU2498 - hypothetical protein (TIGR), at 2,609,375 to 2,609,668 DVU2498 DVU2499: ftsZ - cell division protein FtsZ (TIGR), at 2,609,897 to 2,611,246 ftsZ Position (kb) 2609 2610Strain fitness (log2 ratio) -1 0 1 2at 2608.403 kb on - strandat 2608.503 kb on + strandat 2608.566 kb on + strandat 2608.714 kb on - strand, within DVU2497at 2608.806 kb on - strand, within DVU2497at 2608.839 kb on + strand, within DVU2497at 2608.860 kb on + strand, within DVU2497at 2609.010 kb on - strand, within DVU2497at 2609.050 kb on + strand, within DVU2497at 2609.050 kb on + strand, within DVU2497at 2609.050 kb on + strand, within DVU2497at 2609.058 kb on - strand, within DVU2497at 2609.058 kb on - strand, within DVU2497at 2609.109 kb on + strand, within DVU2497at 2609.145 kb on - strand, within DVU2497at 2609.244 kb on + strand, within DVU2497at 2609.353 kb on - strandat 2609.480 kb on + strand, within DVU2498at 2609.777 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract
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2,608,403 - +0.1
2,608,503 + -0.8
2,608,566 + -0.2
2,608,714 - DVU2497 0.13 -0.8
2,608,806 - DVU2497 0.26 -0.8
2,608,839 + DVU2497 0.30 +0.6
2,608,860 + DVU2497 0.33 -0.4
2,609,010 - DVU2497 0.54 -0.4
2,609,050 + DVU2497 0.59 +0.5
2,609,050 + DVU2497 0.59 -0.4
2,609,050 + DVU2497 0.59 +1.7
2,609,058 - DVU2497 0.60 +0.2
2,609,058 - DVU2497 0.60 -0.3
2,609,109 + DVU2497 0.67 +1.9
2,609,145 - DVU2497 0.72 -0.7
2,609,244 + DVU2497 0.85 -0.1
2,609,353 - +0.7
2,609,480 + DVU2498 0.36 +0.1
2,609,777 + -0.6

Or see this region's nucleotide sequence