Experiment: Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2183 and DVU2184 are separated by 34 nucleotides DVU2184 and DVU2185 are separated by 3 nucleotides
DVU2183: DVU2183 - hypothetical protein (TIGR), at 2,280,885 to 2,281,616
DVU2183
DVU2184: DVU2184 - DNA-binding domain, excisionase family (TIGR), at 2,281,651 to 2,281,869
DVU2184
DVU2185: DVU2185 - terminase, large subunit, putative (TIGR), at 2,281,873 to 2,283,798
DVU2185
Position (kb)
2281
2282 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2280.682 kb on - strand at 2281.028 kb on - strand, within DVU2183 at 2281.665 kb on - strand at 2281.713 kb on + strand, within DVU2184 at 2281.805 kb on + strand, within DVU2184 at 2281.818 kb on - strand, within DVU2184 at 2281.823 kb on - strand, within DVU2184 at 2281.823 kb on - strand, within DVU2184 at 2281.828 kb on - strand, within DVU2184 at 2281.865 kb on + strand at 2281.879 kb on + strand at 2281.915 kb on + strand at 2281.967 kb on - strand at 2282.026 kb on - strand at 2282.046 kb on - strand at 2282.059 kb on + strand at 2282.153 kb on + strand, within DVU2185 at 2282.161 kb on - strand, within DVU2185 at 2282.185 kb on - strand, within DVU2185 at 2282.248 kb on + strand, within DVU2185 at 2282.256 kb on - strand, within DVU2185 at 2282.289 kb on + strand, within DVU2185 at 2282.332 kb on + strand, within DVU2185 at 2282.382 kb on + strand, within DVU2185 at 2282.387 kb on + strand, within DVU2185 at 2282.395 kb on - strand, within DVU2185 at 2282.395 kb on - strand, within DVU2185 at 2282.401 kb on - strand, within DVU2185 at 2282.418 kb on - strand, within DVU2185 at 2282.420 kb on + strand, within DVU2185 at 2282.435 kb on + strand, within DVU2185 at 2282.491 kb on + strand, within DVU2185 at 2282.504 kb on + strand, within DVU2185 at 2282.546 kb on + strand, within DVU2185 at 2282.648 kb on + strand, within DVU2185 at 2282.653 kb on + strand, within DVU2185 at 2282.656 kb on - strand, within DVU2185 at 2282.658 kb on + strand, within DVU2185 at 2282.658 kb on + strand, within DVU2185 at 2282.661 kb on - strand, within DVU2185 at 2282.661 kb on - strand, within DVU2185 at 2282.661 kb on - strand, within DVU2185 at 2282.687 kb on + strand, within DVU2185 at 2282.768 kb on + strand, within DVU2185 at 2282.804 kb on + strand, within DVU2185 at 2282.812 kb on - strand, within DVU2185
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract remove 2,280,682 - -0.4 2,281,028 - DVU2183 0.20 -0.4 2,281,665 - +0.4 2,281,713 + DVU2184 0.28 +1.0 2,281,805 + DVU2184 0.70 -1.0 2,281,818 - DVU2184 0.76 -0.6 2,281,823 - DVU2184 0.79 +2.0 2,281,823 - DVU2184 0.79 +0.7 2,281,828 - DVU2184 0.81 +0.5 2,281,865 + -0.5 2,281,879 + -0.2 2,281,915 + -0.6 2,281,967 - -1.8 2,282,026 - -0.3 2,282,046 - -0.2 2,282,059 + +1.0 2,282,153 + DVU2185 0.15 -1.6 2,282,161 - DVU2185 0.15 +0.0 2,282,185 - DVU2185 0.16 -0.1 2,282,248 + DVU2185 0.19 -0.2 2,282,256 - DVU2185 0.20 -1.1 2,282,289 + DVU2185 0.22 -1.0 2,282,332 + DVU2185 0.24 +0.3 2,282,382 + DVU2185 0.26 +0.1 2,282,387 + DVU2185 0.27 +0.1 2,282,395 - DVU2185 0.27 -0.1 2,282,395 - DVU2185 0.27 -1.1 2,282,401 - DVU2185 0.27 -0.2 2,282,418 - DVU2185 0.28 -0.5 2,282,420 + DVU2185 0.28 -0.2 2,282,435 + DVU2185 0.29 -0.3 2,282,491 + DVU2185 0.32 -0.6 2,282,504 + DVU2185 0.33 +0.3 2,282,546 + DVU2185 0.35 -0.1 2,282,648 + DVU2185 0.40 +0.0 2,282,653 + DVU2185 0.40 -0.2 2,282,656 - DVU2185 0.41 -0.7 2,282,658 + DVU2185 0.41 -2.1 2,282,658 + DVU2185 0.41 +0.0 2,282,661 - DVU2185 0.41 -0.6 2,282,661 - DVU2185 0.41 -0.6 2,282,661 - DVU2185 0.41 -0.2 2,282,687 + DVU2185 0.42 -0.8 2,282,768 + DVU2185 0.46 +0.0 2,282,804 + DVU2185 0.48 -0.6 2,282,812 - DVU2185 0.49 +0.0
Or see this region's nucleotide sequence