Experiment: Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0744 and DVU0745 are separated by 232 nucleotides DVU0745 and cysW are separated by 410 nucleotides
DVU0744: DVU0744 - sigma-54 dependent transcriptional regulator/response regulator (TIGR), at 832,468 to 834,177
DVU0744
DVU0745: DVU0745 - ABC transporter, periplasmic substrate-binding protein (TIGR), at 834,410 to 835,228
DVU0745
DVU0746: cysW - ABC transporter, permease protein (TIGR), at 835,639 to 836,385
cysW
Position (kb) 834
835
836 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 833.411 kb on + strand, within DVU0744 at 833.419 kb on - strand, within DVU0744 at 833.612 kb on + strand, within DVU0744 at 833.612 kb on + strand, within DVU0744 at 833.681 kb on - strand, within DVU0744 at 833.774 kb on - strand, within DVU0744 at 833.798 kb on + strand, within DVU0744 at 833.855 kb on + strand, within DVU0744 at 833.857 kb on + strand, within DVU0744 at 833.865 kb on - strand, within DVU0744 at 833.865 kb on - strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.890 kb on + strand, within DVU0744 at 833.948 kb on + strand, within DVU0744 at 833.956 kb on - strand, within DVU0744 at 833.956 kb on - strand, within DVU0744 at 833.966 kb on - strand, within DVU0744 at 833.966 kb on - strand, within DVU0744 at 834.143 kb on + strand at 834.556 kb on + strand, within DVU0745 at 834.572 kb on + strand, within DVU0745 at 834.603 kb on - strand, within DVU0745 at 834.604 kb on - strand, within DVU0745 at 834.791 kb on + strand, within DVU0745 at 834.857 kb on - strand, within DVU0745 at 834.928 kb on + strand, within DVU0745 at 835.041 kb on - strand, within DVU0745 at 835.097 kb on - strand, within DVU0745 at 835.116 kb on - strand, within DVU0745 at 835.207 kb on - strand at 835.207 kb on - strand at 835.232 kb on + strand at 835.266 kb on + strand at 835.359 kb on + strand at 835.438 kb on - strand at 835.684 kb on + strand at 835.720 kb on + strand, within cysW at 835.789 kb on - strand, within cysW at 835.819 kb on + strand, within cysW at 835.820 kb on - strand, within cysW at 835.890 kb on - strand, within cysW at 835.914 kb on + strand, within cysW at 836.006 kb on + strand, within cysW at 836.030 kb on + strand, within cysW at 836.143 kb on + strand, within cysW
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Thiosulfate (60-15 mM) + 0.1% Yeast Extract remove 833,411 + DVU0744 0.55 +0.2 833,419 - DVU0744 0.56 -0.8 833,612 + DVU0744 0.67 -0.5 833,612 + DVU0744 0.67 -0.0 833,681 - DVU0744 0.71 -2.1 833,774 - DVU0744 0.76 -0.7 833,798 + DVU0744 0.78 -2.4 833,855 + DVU0744 0.81 -0.4 833,857 + DVU0744 0.81 -0.3 833,865 - DVU0744 0.82 -0.3 833,865 - DVU0744 0.82 -1.2 833,890 + DVU0744 0.83 -0.1 833,890 + DVU0744 0.83 -0.2 833,890 + DVU0744 0.83 +0.0 833,948 + DVU0744 0.87 -0.1 833,956 - DVU0744 0.87 +0.0 833,956 - DVU0744 0.87 -0.2 833,966 - DVU0744 0.88 -1.6 833,966 - DVU0744 0.88 -0.1 834,143 + -0.2 834,556 + DVU0745 0.18 +0.2 834,572 + DVU0745 0.20 +0.2 834,603 - DVU0745 0.24 +0.6 834,604 - DVU0745 0.24 +1.4 834,791 + DVU0745 0.47 +0.7 834,857 - DVU0745 0.55 -0.1 834,928 + DVU0745 0.63 +0.3 835,041 - DVU0745 0.77 +0.2 835,097 - DVU0745 0.84 +0.3 835,116 - DVU0745 0.86 +0.6 835,207 - -1.6 835,207 - -0.0 835,232 + -1.6 835,266 + -1.1 835,359 + -0.5 835,438 - +0.5 835,684 + -0.5 835,720 + cysW DVU0746 0.11 +0.2 835,789 - cysW DVU0746 0.20 +1.5 835,819 + cysW DVU0746 0.24 -3.2 835,820 - cysW DVU0746 0.24 -0.1 835,890 - cysW DVU0746 0.34 -0.5 835,914 + cysW DVU0746 0.37 +0.7 836,006 + cysW DVU0746 0.49 +0.3 836,030 + cysW DVU0746 0.52 +0.4 836,143 + cysW DVU0746 0.67 -0.5
Or see this region's nucleotide sequence