Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06076 and H281DRAFT_06077 are separated by 287 nucleotides H281DRAFT_06077 and H281DRAFT_06078 are separated by 243 nucleotides H281DRAFT_06078 and H281DRAFT_06079 are separated by 113 nucleotides
H281DRAFT_06076: H281DRAFT_06076 - diguanylate cyclase (GGDEF) domain-containing protein, at 92,369 to 94,075
_06076
H281DRAFT_06077: H281DRAFT_06077 - transcriptional regulator, LysR family, at 94,363 to 95,328
_06077
H281DRAFT_06078: H281DRAFT_06078 - protein of unknown function (DUF4148), at 95,572 to 95,883
_06078
H281DRAFT_06079: H281DRAFT_06079 - Uncharacterized membrane protein, DUF373 family, at 95,997 to 96,563
_06079
Position (kb) 94
95
96 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 93.480 kb on + strand, within H281DRAFT_06076 at 93.480 kb on + strand, within H281DRAFT_06076 at 93.567 kb on + strand, within H281DRAFT_06076 at 93.567 kb on + strand, within H281DRAFT_06076 at 93.568 kb on - strand, within H281DRAFT_06076 at 93.569 kb on + strand, within H281DRAFT_06076 at 93.569 kb on + strand, within H281DRAFT_06076 at 93.569 kb on + strand, within H281DRAFT_06076 at 93.569 kb on + strand, within H281DRAFT_06076 at 93.569 kb on + strand, within H281DRAFT_06076 at 93.570 kb on - strand, within H281DRAFT_06076 at 93.570 kb on - strand, within H281DRAFT_06076 at 93.570 kb on - strand, within H281DRAFT_06076 at 93.570 kb on - strand, within H281DRAFT_06076 at 93.570 kb on - strand, within H281DRAFT_06076 at 93.570 kb on - strand, within H281DRAFT_06076 at 93.570 kb on - strand, within H281DRAFT_06076 at 93.625 kb on + strand, within H281DRAFT_06076 at 93.657 kb on - strand, within H281DRAFT_06076 at 93.763 kb on - strand, within H281DRAFT_06076 at 93.763 kb on - strand, within H281DRAFT_06076 at 93.810 kb on - strand, within H281DRAFT_06076 at 94.013 kb on + strand at 94.013 kb on + strand at 94.173 kb on - strand at 94.234 kb on + strand at 94.373 kb on + strand at 94.653 kb on + strand, within H281DRAFT_06077 at 94.678 kb on + strand, within H281DRAFT_06077 at 94.678 kb on + strand, within H281DRAFT_06077 at 94.678 kb on + strand, within H281DRAFT_06077 at 94.678 kb on + strand, within H281DRAFT_06077 at 94.679 kb on - strand, within H281DRAFT_06077 at 94.679 kb on - strand, within H281DRAFT_06077 at 94.702 kb on + strand, within H281DRAFT_06077 at 94.703 kb on - strand, within H281DRAFT_06077 at 94.856 kb on + strand, within H281DRAFT_06077 at 94.877 kb on - strand, within H281DRAFT_06077 at 95.129 kb on + strand, within H281DRAFT_06077 at 95.146 kb on + strand, within H281DRAFT_06077 at 95.338 kb on - strand at 95.338 kb on - strand at 95.341 kb on + strand at 95.341 kb on + strand at 95.341 kb on + strand at 95.341 kb on + strand at 95.342 kb on - strand at 95.342 kb on - strand at 95.342 kb on - strand at 95.342 kb on - strand at 95.342 kb on - strand at 95.499 kb on - strand at 95.502 kb on + strand at 95.503 kb on - strand at 95.539 kb on + strand at 95.564 kb on - strand at 95.567 kb on + strand at 95.567 kb on + strand at 95.568 kb on - strand at 95.568 kb on - strand at 95.669 kb on + strand, within H281DRAFT_06078 at 95.811 kb on - strand, within H281DRAFT_06078 at 95.869 kb on + strand at 95.870 kb on - strand at 95.889 kb on + strand at 96.201 kb on - strand, within H281DRAFT_06079 at 96.203 kb on + strand, within H281DRAFT_06079 at 96.203 kb on + strand, within H281DRAFT_06079 at 96.241 kb on - strand, within H281DRAFT_06079
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 93,480 + H281DRAFT_06076 0.65 +0.3 93,480 + H281DRAFT_06076 0.65 -0.1 93,567 + H281DRAFT_06076 0.70 -0.3 93,567 + H281DRAFT_06076 0.70 +0.5 93,568 - H281DRAFT_06076 0.70 -1.0 93,569 + H281DRAFT_06076 0.70 -0.2 93,569 + H281DRAFT_06076 0.70 +0.2 93,569 + H281DRAFT_06076 0.70 -0.0 93,569 + H281DRAFT_06076 0.70 +0.8 93,569 + H281DRAFT_06076 0.70 +0.2 93,570 - H281DRAFT_06076 0.70 +0.3 93,570 - H281DRAFT_06076 0.70 -0.0 93,570 - H281DRAFT_06076 0.70 +0.1 93,570 - H281DRAFT_06076 0.70 -0.4 93,570 - H281DRAFT_06076 0.70 -0.5 93,570 - H281DRAFT_06076 0.70 +0.4 93,570 - H281DRAFT_06076 0.70 +0.9 93,625 + H281DRAFT_06076 0.74 -0.8 93,657 - H281DRAFT_06076 0.75 -0.2 93,763 - H281DRAFT_06076 0.82 +2.1 93,763 - H281DRAFT_06076 0.82 -0.1 93,810 - H281DRAFT_06076 0.84 +0.8 94,013 + -0.1 94,013 + -0.8 94,173 - +0.6 94,234 + -0.7 94,373 + +1.9 94,653 + H281DRAFT_06077 0.30 +2.6 94,678 + H281DRAFT_06077 0.33 +1.8 94,678 + H281DRAFT_06077 0.33 +1.3 94,678 + H281DRAFT_06077 0.33 +1.6 94,678 + H281DRAFT_06077 0.33 +1.7 94,679 - H281DRAFT_06077 0.33 +1.2 94,679 - H281DRAFT_06077 0.33 +1.6 94,702 + H281DRAFT_06077 0.35 +0.3 94,703 - H281DRAFT_06077 0.35 +1.0 94,856 + H281DRAFT_06077 0.51 +1.6 94,877 - H281DRAFT_06077 0.53 +1.2 95,129 + H281DRAFT_06077 0.79 +1.7 95,146 + H281DRAFT_06077 0.81 +1.2 95,338 - -0.2 95,338 - +0.0 95,341 + +1.1 95,341 + -3.0 95,341 + -0.2 95,341 + -0.1 95,342 - -0.9 95,342 - +0.5 95,342 - +0.0 95,342 - +0.2 95,342 - -0.2 95,499 - +0.1 95,502 + -1.1 95,503 - +1.1 95,539 + -0.6 95,564 - +0.4 95,567 + -0.0 95,567 + -0.2 95,568 - -0.1 95,568 - -0.4 95,669 + H281DRAFT_06078 0.31 +0.7 95,811 - H281DRAFT_06078 0.77 +0.1 95,869 + -0.1 95,870 - -0.5 95,889 + +0.1 96,201 - H281DRAFT_06079 0.36 -0.1 96,203 + H281DRAFT_06079 0.36 -0.0 96,203 + H281DRAFT_06079 0.36 +0.8 96,241 - H281DRAFT_06079 0.43 -1.4
Or see this region's nucleotide sequence