Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04444 and H281DRAFT_04445 are separated by 345 nucleotides H281DRAFT_04445 and H281DRAFT_04446 are separated by 235 nucleotides
H281DRAFT_04444: H281DRAFT_04444 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 161,891 to 163,111
_04444
H281DRAFT_04445: H281DRAFT_04445 - alanyl-tRNA synthetase, at 163,457 to 166,081
_04445
H281DRAFT_04446: H281DRAFT_04446 - transcriptional regulator, LysR family, at 166,317 to 167,276
_04446
Position (kb) 163
164
165
166
167 Strain fitness (log2 ratio) -1
0
1
2 at 162.496 kb on + strand, within H281DRAFT_04444 at 162.497 kb on - strand, within H281DRAFT_04444 at 162.498 kb on + strand, within H281DRAFT_04444 at 162.499 kb on - strand, within H281DRAFT_04444 at 162.499 kb on - strand, within H281DRAFT_04444 at 162.499 kb on - strand, within H281DRAFT_04444 at 162.558 kb on + strand, within H281DRAFT_04444 at 162.558 kb on + strand, within H281DRAFT_04444 at 162.558 kb on + strand, within H281DRAFT_04444 at 162.640 kb on + strand, within H281DRAFT_04444 at 162.640 kb on + strand, within H281DRAFT_04444 at 162.733 kb on - strand, within H281DRAFT_04444 at 162.804 kb on + strand, within H281DRAFT_04444 at 162.804 kb on + strand, within H281DRAFT_04444 at 162.804 kb on + strand, within H281DRAFT_04444 at 162.804 kb on + strand, within H281DRAFT_04444 at 162.804 kb on + strand, within H281DRAFT_04444 at 162.805 kb on - strand, within H281DRAFT_04444 at 162.915 kb on + strand, within H281DRAFT_04444 at 162.918 kb on + strand at 162.918 kb on + strand, within H281DRAFT_04444 at 163.128 kb on + strand at 163.128 kb on + strand at 163.129 kb on - strand at 163.133 kb on - strand at 163.133 kb on - strand at 163.133 kb on - strand at 163.133 kb on - strand at 163.133 kb on - strand at 163.159 kb on + strand at 163.159 kb on + strand at 163.159 kb on + strand at 163.160 kb on - strand at 163.160 kb on - strand at 163.160 kb on - strand at 163.160 kb on - strand at 163.365 kb on + strand at 163.367 kb on + strand at 163.367 kb on + strand at 166.434 kb on - strand, within H281DRAFT_04446 at 166.434 kb on - strand, within H281DRAFT_04446 at 166.612 kb on + strand, within H281DRAFT_04446 at 166.613 kb on - strand, within H281DRAFT_04446 at 166.613 kb on - strand, within H281DRAFT_04446 at 166.660 kb on + strand, within H281DRAFT_04446 at 166.676 kb on - strand, within H281DRAFT_04446 at 166.676 kb on - strand, within H281DRAFT_04446
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 162,496 + H281DRAFT_04444 0.50 +0.2 162,497 - H281DRAFT_04444 0.50 -0.2 162,498 + H281DRAFT_04444 0.50 +0.0 162,499 - H281DRAFT_04444 0.50 +0.3 162,499 - H281DRAFT_04444 0.50 -0.1 162,499 - H281DRAFT_04444 0.50 +0.2 162,558 + H281DRAFT_04444 0.55 -0.0 162,558 + H281DRAFT_04444 0.55 +0.4 162,558 + H281DRAFT_04444 0.55 -0.3 162,640 + H281DRAFT_04444 0.61 +0.0 162,640 + H281DRAFT_04444 0.61 -1.2 162,733 - H281DRAFT_04444 0.69 -0.1 162,804 + H281DRAFT_04444 0.75 +0.9 162,804 + H281DRAFT_04444 0.75 +0.5 162,804 + H281DRAFT_04444 0.75 -1.0 162,804 + H281DRAFT_04444 0.75 +0.4 162,804 + H281DRAFT_04444 0.75 -0.0 162,805 - H281DRAFT_04444 0.75 +1.2 162,915 + H281DRAFT_04444 0.84 +0.4 162,918 + +0.5 162,918 + H281DRAFT_04444 0.84 +0.3 163,128 + +1.4 163,128 + -0.2 163,129 - -0.0 163,133 - +0.4 163,133 - +0.9 163,133 - -0.0 163,133 - +1.4 163,133 - -0.3 163,159 + -0.2 163,159 + +0.3 163,159 + +0.3 163,160 - +0.3 163,160 - +0.8 163,160 - +0.4 163,160 - +0.8 163,365 + +1.1 163,367 + +2.1 163,367 + -0.1 166,434 - H281DRAFT_04446 0.12 +0.6 166,434 - H281DRAFT_04446 0.12 +0.6 166,612 + H281DRAFT_04446 0.31 -0.4 166,613 - H281DRAFT_04446 0.31 +0.6 166,613 - H281DRAFT_04446 0.31 +0.3 166,660 + H281DRAFT_04446 0.36 -0.6 166,676 - H281DRAFT_04446 0.37 +0.0 166,676 - H281DRAFT_04446 0.37 +0.3
Or see this region's nucleotide sequence