Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03834 and H281DRAFT_03835 are separated by 33 nucleotides H281DRAFT_03835 and H281DRAFT_03836 overlap by 4 nucleotides H281DRAFT_03836 and H281DRAFT_03837 are separated by 12 nucleotides
H281DRAFT_03834: H281DRAFT_03834 - NitT/TauT family transport system substrate-binding protein, at 361,080 to 362,150
_03834
H281DRAFT_03835: H281DRAFT_03835 - NitT/TauT family transport system permease protein, at 362,184 to 362,999
_03835
H281DRAFT_03836: H281DRAFT_03836 - NitT/TauT family transport system ATP-binding protein, at 362,996 to 363,787
_03836
H281DRAFT_03837: H281DRAFT_03837 - hypothetical protein, at 363,800 to 364,504
_03837
Position (kb) 362
363 Strain fitness (log2 ratio) -2
-1
0
1 at 361.257 kb on + strand, within H281DRAFT_03834 at 362.157 kb on + strand at 362.230 kb on + strand at 362.231 kb on - strand at 362.266 kb on - strand, within H281DRAFT_03835 at 362.878 kb on + strand, within H281DRAFT_03835 at 362.879 kb on - strand, within H281DRAFT_03835 at 362.902 kb on - strand, within H281DRAFT_03835 at 363.574 kb on + strand, within H281DRAFT_03836 at 363.683 kb on - strand, within H281DRAFT_03836
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 361,257 + H281DRAFT_03834 0.17 +0.4 362,157 + -1.2 362,230 + +0.4 362,231 - -1.9 362,266 - H281DRAFT_03835 0.10 +0.0 362,878 + H281DRAFT_03835 0.85 +0.9 362,879 - H281DRAFT_03835 0.85 +0.3 362,902 - H281DRAFT_03835 0.88 +1.0 363,574 + H281DRAFT_03836 0.73 +0.6 363,683 - H281DRAFT_03836 0.87 -0.0
Or see this region's nucleotide sequence