Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03737 and H281DRAFT_03738 are separated by 150 nucleotides H281DRAFT_03738 and H281DRAFT_03739 are separated by 56 nucleotides H281DRAFT_03739 and H281DRAFT_03740 overlap by 4 nucleotides
H281DRAFT_03737: H281DRAFT_03737 - Predicted phosphohydrolases, at 252,173 to 253,861
_03737
H281DRAFT_03738: H281DRAFT_03738 - hypothetical protein, at 254,012 to 254,452
_03738
H281DRAFT_03739: H281DRAFT_03739 - Enoyl-CoA hydratase/carnithine racemase, at 254,509 to 255,273
_03739
H281DRAFT_03740: H281DRAFT_03740 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 255,270 to 256,436
_03740
Position (kb) 254
255 Strain fitness (log2 ratio) -2
-1
0
1 at 253.335 kb on + strand, within H281DRAFT_03737 at 253.430 kb on - strand, within H281DRAFT_03737 at 253.430 kb on - strand, within H281DRAFT_03737 at 253.604 kb on - strand, within H281DRAFT_03737 at 253.604 kb on - strand, within H281DRAFT_03737 at 253.772 kb on + strand at 253.815 kb on - strand at 253.928 kb on + strand at 253.994 kb on - strand at 254.011 kb on + strand at 254.011 kb on + strand at 254.384 kb on + strand, within H281DRAFT_03738 at 254.384 kb on + strand, within H281DRAFT_03738 at 254.490 kb on - strand at 254.511 kb on - strand at 254.729 kb on + strand, within H281DRAFT_03739 at 254.736 kb on - strand, within H281DRAFT_03739 at 254.768 kb on + strand, within H281DRAFT_03739 at 255.176 kb on + strand, within H281DRAFT_03739 at 255.311 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 253,335 + H281DRAFT_03737 0.69 +0.2 253,430 - H281DRAFT_03737 0.74 +0.1 253,430 - H281DRAFT_03737 0.74 +1.2 253,604 - H281DRAFT_03737 0.85 +0.5 253,604 - H281DRAFT_03737 0.85 -1.1 253,772 + -0.1 253,815 - -0.3 253,928 + +0.3 253,994 - -1.4 254,011 + +1.0 254,011 + +1.2 254,384 + H281DRAFT_03738 0.84 +0.4 254,384 + H281DRAFT_03738 0.84 +0.9 254,490 - +0.7 254,511 - -1.9 254,729 + H281DRAFT_03739 0.29 +1.0 254,736 - H281DRAFT_03739 0.30 -0.6 254,768 + H281DRAFT_03739 0.34 -0.3 255,176 + H281DRAFT_03739 0.87 -0.1 255,311 + -0.5
Or see this region's nucleotide sequence