Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03447 and H281DRAFT_03448 are separated by 474 nucleotides H281DRAFT_03448 and H281DRAFT_03449 are separated by 23 nucleotides H281DRAFT_03449 and H281DRAFT_03450 are separated by 10 nucleotides
H281DRAFT_03447: H281DRAFT_03447 - phasin family protein, at 529,056 to 529,565
_03447
H281DRAFT_03448: H281DRAFT_03448 - Predicted ester cyclase, at 530,040 to 530,468
_03448
H281DRAFT_03449: H281DRAFT_03449 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 530,492 to 531,997
_03449
H281DRAFT_03450: H281DRAFT_03450 - ABC-2 type transport system permease protein, at 532,008 to 533,150
_03450
Position (kb) 530
531
532 Strain fitness (log2 ratio) -1
0
1
2 at 529.621 kb on - strand at 530.119 kb on - strand, within H281DRAFT_03448 at 530.184 kb on + strand, within H281DRAFT_03448 at 530.466 kb on + strand at 530.676 kb on - strand, within H281DRAFT_03449 at 530.707 kb on - strand, within H281DRAFT_03449 at 530.865 kb on + strand, within H281DRAFT_03449 at 531.167 kb on - strand, within H281DRAFT_03449 at 531.167 kb on - strand, within H281DRAFT_03449 at 531.167 kb on - strand, within H281DRAFT_03449 at 531.167 kb on - strand, within H281DRAFT_03449 at 531.392 kb on + strand, within H281DRAFT_03449 at 531.392 kb on + strand, within H281DRAFT_03449 at 531.392 kb on + strand, within H281DRAFT_03449 at 531.427 kb on + strand, within H281DRAFT_03449 at 531.483 kb on + strand, within H281DRAFT_03449 at 531.547 kb on - strand, within H281DRAFT_03449 at 531.568 kb on + strand, within H281DRAFT_03449 at 532.066 kb on - strand at 532.211 kb on + strand, within H281DRAFT_03450 at 532.438 kb on + strand, within H281DRAFT_03450 at 532.621 kb on + strand, within H281DRAFT_03450 at 532.829 kb on + strand, within H281DRAFT_03450
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 529,621 - +0.4 530,119 - H281DRAFT_03448 0.18 -0.6 530,184 + H281DRAFT_03448 0.34 +0.2 530,466 + -0.2 530,676 - H281DRAFT_03449 0.12 +0.6 530,707 - H281DRAFT_03449 0.14 +1.4 530,865 + H281DRAFT_03449 0.25 +0.5 531,167 - H281DRAFT_03449 0.45 +0.1 531,167 - H281DRAFT_03449 0.45 +0.4 531,167 - H281DRAFT_03449 0.45 +0.0 531,167 - H281DRAFT_03449 0.45 +0.9 531,392 + H281DRAFT_03449 0.60 +0.3 531,392 + H281DRAFT_03449 0.60 +0.4 531,392 + H281DRAFT_03449 0.60 -0.1 531,427 + H281DRAFT_03449 0.62 +2.0 531,483 + H281DRAFT_03449 0.66 +0.4 531,547 - H281DRAFT_03449 0.70 +1.0 531,568 + H281DRAFT_03449 0.71 +0.5 532,066 - +0.5 532,211 + H281DRAFT_03450 0.18 +0.4 532,438 + H281DRAFT_03450 0.38 +0.1 532,621 + H281DRAFT_03450 0.54 -0.6 532,829 + H281DRAFT_03450 0.72 +0.1
Or see this region's nucleotide sequence