Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02637 and H281DRAFT_02638 are separated by 2 nucleotides H281DRAFT_02638 and H281DRAFT_02639 are separated by 64 nucleotides H281DRAFT_02639 and H281DRAFT_02640 are separated by 43 nucleotides H281DRAFT_02640 and H281DRAFT_02641 overlap by 1 nucleotides
H281DRAFT_02637: H281DRAFT_02637 - Outer membrane protein TolC, at 214,469 to 215,959
_02637
H281DRAFT_02638: H281DRAFT_02638 - Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA), at 215,962 to 217,257
_02638
H281DRAFT_02639: H281DRAFT_02639 - Cu and Ag efflux protein CusF, at 217,322 to 217,669
_02639
H281DRAFT_02640: H281DRAFT_02640 - hypothetical protein, at 217,713 to 218,111
_02640
H281DRAFT_02641: H281DRAFT_02641 - putative copper resistance protein D, at 218,111 to 219,052
_02641
Position (kb) 215
216
217
218 Strain fitness (log2 ratio) -1
0
1 at 215.127 kb on - strand, within H281DRAFT_02637 at 215.229 kb on - strand, within H281DRAFT_02637 at 215.519 kb on + strand, within H281DRAFT_02637 at 215.519 kb on + strand, within H281DRAFT_02637 at 215.520 kb on - strand, within H281DRAFT_02637 at 215.520 kb on - strand, within H281DRAFT_02637 at 215.521 kb on + strand, within H281DRAFT_02637 at 215.521 kb on + strand, within H281DRAFT_02637 at 215.575 kb on - strand, within H281DRAFT_02637 at 215.606 kb on + strand, within H281DRAFT_02637 at 215.656 kb on + strand, within H281DRAFT_02637 at 215.754 kb on - strand, within H281DRAFT_02637 at 216.063 kb on + strand at 216.115 kb on + strand, within H281DRAFT_02638 at 216.466 kb on + strand at 216.466 kb on + strand, within H281DRAFT_02638 at 216.467 kb on - strand, within H281DRAFT_02638 at 216.590 kb on - strand, within H281DRAFT_02638 at 216.590 kb on - strand at 217.018 kb on + strand, within H281DRAFT_02638 at 217.232 kb on - strand at 217.808 kb on + strand, within H281DRAFT_02640 at 217.809 kb on - strand, within H281DRAFT_02640 at 217.978 kb on + strand, within H281DRAFT_02640 at 218.092 kb on - strand at 218.093 kb on + strand at 218.109 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 215,127 - H281DRAFT_02637 0.44 +0.3 215,229 - H281DRAFT_02637 0.51 +0.1 215,519 + H281DRAFT_02637 0.70 +0.1 215,519 + H281DRAFT_02637 0.70 +0.1 215,520 - H281DRAFT_02637 0.70 +0.2 215,520 - H281DRAFT_02637 0.70 +0.3 215,521 + H281DRAFT_02637 0.71 -0.3 215,521 + H281DRAFT_02637 0.71 -0.0 215,575 - H281DRAFT_02637 0.74 +0.5 215,606 + H281DRAFT_02637 0.76 -0.2 215,656 + H281DRAFT_02637 0.80 -0.1 215,754 - H281DRAFT_02637 0.86 -0.4 216,063 + +1.3 216,115 + H281DRAFT_02638 0.12 +1.2 216,466 + -1.7 216,466 + H281DRAFT_02638 0.39 +0.5 216,467 - H281DRAFT_02638 0.39 +0.0 216,590 - H281DRAFT_02638 0.48 +1.4 216,590 - +1.7 217,018 + H281DRAFT_02638 0.81 +0.4 217,232 - +1.0 217,808 + H281DRAFT_02640 0.24 +0.4 217,809 - H281DRAFT_02640 0.24 -0.2 217,978 + H281DRAFT_02640 0.66 +0.5 218,092 - +0.7 218,093 + -0.6 218,109 + -0.1
Or see this region's nucleotide sequence