Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02242 and H281DRAFT_02243 are separated by 67 nucleotides H281DRAFT_02243 and H281DRAFT_02244 are separated by 249 nucleotides H281DRAFT_02244 and H281DRAFT_02245 are separated by 156 nucleotides
H281DRAFT_02242: H281DRAFT_02242 - DNA protecting protein DprA, at 386,698 to 387,960
_02242
H281DRAFT_02243: H281DRAFT_02243 - Thiol-disulfide isomerase or thioredoxin, at 388,028 to 388,405
_02243
H281DRAFT_02244: H281DRAFT_02244 - DNA topoisomerase-3, at 388,655 to 391,324
_02244
H281DRAFT_02245: H281DRAFT_02245 - transcriptional regulator, LysR family, at 391,481 to 392,584
_02245
Position (kb) 388
389
390
391
392 Strain fitness (log2 ratio) -1
0
1 at 387.810 kb on - strand, within H281DRAFT_02242 at 387.810 kb on - strand, within H281DRAFT_02242 at 387.835 kb on + strand at 387.836 kb on - strand at 387.842 kb on + strand at 387.843 kb on - strand at 387.845 kb on + strand at 387.845 kb on + strand at 387.845 kb on + strand at 387.845 kb on + strand at 387.846 kb on - strand at 387.907 kb on + strand at 387.908 kb on - strand at 387.984 kb on + strand at 387.984 kb on + strand at 387.984 kb on + strand at 387.984 kb on + strand at 387.984 kb on + strand at 387.984 kb on + strand at 387.984 kb on + strand at 387.985 kb on - strand at 387.985 kb on - strand at 387.985 kb on - strand at 387.985 kb on - strand at 387.985 kb on - strand at 388.423 kb on + strand at 388.423 kb on + strand at 388.635 kb on + strand at 388.635 kb on + strand at 388.635 kb on + strand at 388.635 kb on + strand at 388.635 kb on + strand at 388.635 kb on + strand at 388.635 kb on + strand at 388.636 kb on - strand at 388.636 kb on - strand at 388.636 kb on - strand at 388.636 kb on - strand at 391.309 kb on + strand at 391.388 kb on + strand at 391.449 kb on + strand at 391.482 kb on + strand at 391.804 kb on - strand, within H281DRAFT_02245 at 391.857 kb on + strand, within H281DRAFT_02245 at 391.858 kb on - strand, within H281DRAFT_02245 at 391.972 kb on + strand, within H281DRAFT_02245 at 391.977 kb on - strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.995 kb on + strand, within H281DRAFT_02245 at 391.996 kb on - strand, within H281DRAFT_02245 at 392.070 kb on + strand, within H281DRAFT_02245 at 392.244 kb on + strand, within H281DRAFT_02245 at 392.244 kb on + strand, within H281DRAFT_02245 at 392.245 kb on - strand, within H281DRAFT_02245 at 392.309 kb on - strand, within H281DRAFT_02245
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 387,810 - H281DRAFT_02242 0.88 -0.0 387,810 - H281DRAFT_02242 0.88 -1.4 387,835 + +0.3 387,836 - +0.0 387,842 + +0.4 387,843 - -0.2 387,845 + +0.2 387,845 + +0.6 387,845 + +0.0 387,845 + -0.2 387,846 - +0.1 387,907 + +0.9 387,908 - -0.5 387,984 + -0.1 387,984 + +0.2 387,984 + +0.3 387,984 + +0.4 387,984 + -0.1 387,984 + -0.7 387,984 + -0.8 387,985 - +0.1 387,985 - -0.0 387,985 - -0.1 387,985 - +0.4 387,985 - -0.6 388,423 + +1.5 388,423 + +0.6 388,635 + -0.7 388,635 + +0.5 388,635 + +0.5 388,635 + +0.3 388,635 + +0.2 388,635 + +0.4 388,635 + +0.8 388,636 - -0.2 388,636 - +0.5 388,636 - +0.2 388,636 - -0.6 391,309 + +0.1 391,388 + -0.1 391,449 + +0.2 391,482 + -0.4 391,804 - H281DRAFT_02245 0.29 -0.6 391,857 + H281DRAFT_02245 0.34 -0.7 391,858 - H281DRAFT_02245 0.34 -1.0 391,972 + H281DRAFT_02245 0.44 -0.6 391,977 - H281DRAFT_02245 0.45 -1.4 391,995 + H281DRAFT_02245 0.47 -0.7 391,995 + H281DRAFT_02245 0.47 -0.8 391,995 + H281DRAFT_02245 0.47 -1.6 391,995 + H281DRAFT_02245 0.47 -0.1 391,996 - H281DRAFT_02245 0.47 -0.6 392,070 + H281DRAFT_02245 0.53 +0.4 392,244 + H281DRAFT_02245 0.69 +0.2 392,244 + H281DRAFT_02245 0.69 -0.3 392,245 - H281DRAFT_02245 0.69 -0.0 392,309 - H281DRAFT_02245 0.75 -0.6
Or see this region's nucleotide sequence