Experiment: propionate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00583 and H281DRAFT_00584 overlap by 4 nucleotides H281DRAFT_00584 and H281DRAFT_00585 overlap by 14 nucleotides H281DRAFT_00585 and H281DRAFT_00586 overlap by 4 nucleotides
H281DRAFT_00583: H281DRAFT_00583 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 650,412 to 651,215
_00583
H281DRAFT_00584: H281DRAFT_00584 - [SSU ribosomal protein S18P]-alanine acetyltransferase, at 651,212 to 651,706
_00584
H281DRAFT_00585: H281DRAFT_00585 - DNA polymerase, at 651,693 to 652,901
_00585
H281DRAFT_00586: H281DRAFT_00586 - hypothetical protein, at 652,898 to 653,995
_00586
Position (kb) 651
652
653 Strain fitness (log2 ratio) -1
0
1 at 651.239 kb on + strand at 651.239 kb on + strand at 651.350 kb on + strand, within H281DRAFT_00584 at 651.395 kb on + strand, within H281DRAFT_00584 at 651.508 kb on + strand, within H281DRAFT_00584 at 651.578 kb on + strand, within H281DRAFT_00584 at 651.621 kb on - strand, within H281DRAFT_00584 at 652.854 kb on - strand at 653.119 kb on + strand, within H281DRAFT_00586 at 653.356 kb on - strand, within H281DRAFT_00586 at 653.356 kb on - strand, within H281DRAFT_00586 at 653.405 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.489 kb on + strand, within H281DRAFT_00586 at 653.490 kb on - strand, within H281DRAFT_00586 at 653.639 kb on + strand, within H281DRAFT_00586 at 653.795 kb on + strand, within H281DRAFT_00586 at 653.796 kb on - strand, within H281DRAFT_00586 at 653.796 kb on - strand, within H281DRAFT_00586 at 653.884 kb on + strand, within H281DRAFT_00586
Per-strain Table
Position Strand Gene LocusTag Fraction propionate (C) remove 651,239 + -0.0 651,239 + +0.7 651,350 + H281DRAFT_00584 0.28 -0.7 651,395 + H281DRAFT_00584 0.37 -0.5 651,508 + H281DRAFT_00584 0.60 -0.6 651,578 + H281DRAFT_00584 0.74 -0.7 651,621 - H281DRAFT_00584 0.83 -0.0 652,854 - -0.3 653,119 + H281DRAFT_00586 0.20 +0.1 653,356 - H281DRAFT_00586 0.42 -0.2 653,356 - H281DRAFT_00586 0.42 +0.2 653,405 + H281DRAFT_00586 0.46 +0.2 653,489 + H281DRAFT_00586 0.54 +0.1 653,489 + H281DRAFT_00586 0.54 +0.7 653,489 + H281DRAFT_00586 0.54 -0.2 653,489 + H281DRAFT_00586 0.54 +0.2 653,490 - H281DRAFT_00586 0.54 +0.4 653,639 + H281DRAFT_00586 0.67 -0.2 653,795 + H281DRAFT_00586 0.82 -0.2 653,796 - H281DRAFT_00586 0.82 +0.2 653,796 - H281DRAFT_00586 0.82 -0.2 653,884 + H281DRAFT_00586 0.90 -0.3
Or see this region's nucleotide sequence