Experiment: m.b. Paraquat dichloride 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09540 and PGA1_c09550 are separated by 331 nucleotides PGA1_c09550 and PGA1_c09560 are separated by 124 nucleotides
PGA1_c09540: PGA1_c09540 - phospho-N-acetylmuramoyl-pentapeptide- transferase MraY, at 978,577 to 979,659
_c09540
PGA1_c09550: PGA1_c09550 - Glutaminase (EC 3.5.1.2) <small>(from data)</small>, at 979,991 to 980,905
_c09550
PGA1_c09560: PGA1_c09560 - UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD, at 981,030 to 982,427
_c09560
Position (kb) 979
980
981 Strain fitness (log2 ratio) -2
-1
0
1
2 at 979.653 kb on + strand at 979.840 kb on + strand at 979.840 kb on + strand at 979.924 kb on + strand at 979.924 kb on + strand at 979.932 kb on - strand at 979.937 kb on + strand at 979.938 kb on - strand at 979.938 kb on - strand at 980.066 kb on + strand at 980.074 kb on - strand at 980.113 kb on + strand, within PGA1_c09550 at 980.206 kb on - strand, within PGA1_c09550 at 980.238 kb on - strand, within PGA1_c09550 at 980.291 kb on - strand, within PGA1_c09550 at 980.358 kb on + strand, within PGA1_c09550 at 980.358 kb on + strand, within PGA1_c09550 at 980.400 kb on + strand, within PGA1_c09550 at 980.408 kb on - strand, within PGA1_c09550 at 980.408 kb on - strand, within PGA1_c09550 at 980.408 kb on - strand, within PGA1_c09550 at 980.408 kb on - strand, within PGA1_c09550 at 980.487 kb on - strand, within PGA1_c09550 at 980.515 kb on + strand, within PGA1_c09550 at 980.515 kb on + strand, within PGA1_c09550 at 980.520 kb on + strand, within PGA1_c09550 at 980.536 kb on + strand, within PGA1_c09550 at 980.544 kb on + strand, within PGA1_c09550 at 980.556 kb on - strand, within PGA1_c09550 at 980.623 kb on - strand, within PGA1_c09550 at 980.635 kb on - strand, within PGA1_c09550 at 980.675 kb on + strand, within PGA1_c09550 at 980.675 kb on + strand, within PGA1_c09550 at 980.675 kb on + strand, within PGA1_c09550 at 980.683 kb on - strand, within PGA1_c09550 at 980.683 kb on - strand, within PGA1_c09550 at 980.683 kb on - strand, within PGA1_c09550 at 980.683 kb on - strand, within PGA1_c09550 at 980.701 kb on - strand, within PGA1_c09550 at 980.701 kb on - strand, within PGA1_c09550 at 980.719 kb on - strand, within PGA1_c09550 at 980.745 kb on + strand, within PGA1_c09550 at 980.745 kb on + strand, within PGA1_c09550 at 980.745 kb on + strand, within PGA1_c09550 at 980.753 kb on - strand, within PGA1_c09550 at 980.796 kb on + strand, within PGA1_c09550 at 980.802 kb on + strand, within PGA1_c09550 at 980.810 kb on - strand, within PGA1_c09550 at 980.847 kb on + strand at 980.850 kb on - strand at 980.855 kb on - strand at 980.938 kb on - strand at 981.020 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.016 mg/ml remove 979,653 + +0.2 979,840 + -1.7 979,840 + -0.1 979,924 + +0.4 979,924 + -0.2 979,932 - -0.5 979,937 + -0.1 979,938 - +0.1 979,938 - -0.5 980,066 + +0.6 980,074 - -1.3 980,113 + PGA1_c09550 0.13 +0.6 980,206 - PGA1_c09550 0.23 +0.5 980,238 - PGA1_c09550 0.27 -1.3 980,291 - PGA1_c09550 0.33 +0.0 980,358 + PGA1_c09550 0.40 -2.2 980,358 + PGA1_c09550 0.40 -1.1 980,400 + PGA1_c09550 0.45 +0.9 980,408 - PGA1_c09550 0.46 +1.4 980,408 - PGA1_c09550 0.46 -1.8 980,408 - PGA1_c09550 0.46 -0.6 980,408 - PGA1_c09550 0.46 +0.5 980,487 - PGA1_c09550 0.54 +0.7 980,515 + PGA1_c09550 0.57 +0.4 980,515 + PGA1_c09550 0.57 -2.2 980,520 + PGA1_c09550 0.58 +2.3 980,536 + PGA1_c09550 0.60 -0.4 980,544 + PGA1_c09550 0.60 -0.5 980,556 - PGA1_c09550 0.62 -0.9 980,623 - PGA1_c09550 0.69 -0.2 980,635 - PGA1_c09550 0.70 +0.5 980,675 + PGA1_c09550 0.75 +0.7 980,675 + PGA1_c09550 0.75 -0.7 980,675 + PGA1_c09550 0.75 -0.1 980,683 - PGA1_c09550 0.76 -0.4 980,683 - PGA1_c09550 0.76 -0.1 980,683 - PGA1_c09550 0.76 -1.3 980,683 - PGA1_c09550 0.76 +0.0 980,701 - PGA1_c09550 0.78 +0.5 980,701 - PGA1_c09550 0.78 -1.2 980,719 - PGA1_c09550 0.80 +0.6 980,745 + PGA1_c09550 0.82 +0.2 980,745 + PGA1_c09550 0.82 +0.5 980,745 + PGA1_c09550 0.82 +0.1 980,753 - PGA1_c09550 0.83 -1.3 980,796 + PGA1_c09550 0.88 +0.3 980,802 + PGA1_c09550 0.89 +0.2 980,810 - PGA1_c09550 0.90 -0.3 980,847 + -0.1 980,850 - +0.9 980,855 - +1.1 980,938 - +0.4 981,020 + +0.1
Or see this region's nucleotide sequence