Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_262p02210

Experiment: m.b. Paraquat dichloride 0.016 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPGA1_262p02200 and PGA1_262p02210 are separated by 204 nucleotidesPGA1_262p02210 and PGA1_262p02220 overlap by 7 nucleotides PGA1_262p02200: PGA1_262p02200 - molybdenum import ATP-binding protein ModC, at 237,198 to 238,289 _262p02200 PGA1_262p02210: PGA1_262p02210 - FAD dependent oxidoreductase, at 238,494 to 239,795 _262p02210 PGA1_262p02220: PGA1_262p02220 - ABC transporter, periplasmic solute-binding protein, at 239,789 to 240,859 _262p02220 Position (kb) 238 239 240Strain fitness (log2 ratio) -2 -1 0 1 2at 237.556 kb on + strand, within PGA1_262p02200at 237.586 kb on - strand, within PGA1_262p02200at 237.590 kb on + strand, within PGA1_262p02200at 237.635 kb on + strand, within PGA1_262p02200at 237.643 kb on - strand, within PGA1_262p02200at 237.913 kb on + strand, within PGA1_262p02200at 237.921 kb on - strand, within PGA1_262p02200at 238.206 kb on - strandat 238.388 kb on + strandat 238.404 kb on + strandat 238.412 kb on - strandat 238.481 kb on + strandat 238.675 kb on + strand, within PGA1_262p02210at 238.722 kb on + strand, within PGA1_262p02210at 238.766 kb on + strand, within PGA1_262p02210at 239.150 kb on + strand, within PGA1_262p02210at 239.168 kb on - strand, within PGA1_262p02210at 239.651 kb on - strand, within PGA1_262p02210at 239.716 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.016 mg/ml
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237,556 + PGA1_262p02200 0.33 -1.4
237,586 - PGA1_262p02200 0.36 +0.5
237,590 + PGA1_262p02200 0.36 -0.4
237,635 + PGA1_262p02200 0.40 -0.6
237,643 - PGA1_262p02200 0.41 -0.0
237,913 + PGA1_262p02200 0.65 -0.9
237,921 - PGA1_262p02200 0.66 -0.1
238,206 - -2.1
238,388 + +0.6
238,404 + +2.0
238,412 - -0.4
238,481 + -1.0
238,675 + PGA1_262p02210 0.14 -1.9
238,722 + PGA1_262p02210 0.18 -0.4
238,766 + PGA1_262p02210 0.21 -0.0
239,150 + PGA1_262p02210 0.50 +0.7
239,168 - PGA1_262p02210 0.52 -1.5
239,651 - PGA1_262p02210 0.89 -1.4
239,716 - +1.8

Or see this region's nucleotide sequence