Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c13540

Experiment: m.b. Paraquat dichloride 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.016 mg/ml
1,399,376	-				+1.6
1,399,377	-				+1.0
1,399,377	-				+2.3
1,399,404	+				-0.2
1,399,412	-				-0.9
1,399,460	+				+0.5
1,399,677	+		PGA1_c13530	0.32	+0.0
1,399,682	+		PGA1_c13530	0.33	+1.5
1,399,699	+		PGA1_c13530	0.36	-2.1
1,399,699	+		PGA1_c13530	0.36	+1.0
1,399,699	+		PGA1_c13530	0.36	-0.2
1,399,699	+		PGA1_c13530	0.36	+1.5
1,399,707	-		PGA1_c13530	0.37	-1.4
1,399,739	+		PGA1_c13530	0.42	-1.0
1,399,783	+		PGA1_c13530	0.49	-0.1
1,399,783	+		PGA1_c13530	0.49	+1.0
1,399,889	-		PGA1_c13530	0.65	-0.1
1,399,904	-		PGA1_c13530	0.68	+0.5
1,399,918	-		PGA1_c13530	0.70	+1.0
1,399,929	+		PGA1_c13530	0.71	-0.0
1,399,948	+		PGA1_c13530	0.74	-1.0
1,400,030	+		PGA1_c13530	0.87	-0.6
1,400,038	-		PGA1_c13530	0.88	-1.1
1,400,038	-		PGA1_c13530	0.88	+1.5
1,400,053	-				-0.9
1,400,058	-				+0.3
1,400,060	+				-0.0
1,400,092	-				-1.2
1,400,268	+				+1.1
1,400,268	+				+1.3
1,400,276	-				+0.1
1,400,318	-				-0.3
1,400,334	-				+1.0
1,400,358	+				-0.5
1,400,544	+		PGA1_c13540	0.36	+0.4
1,400,552	-		PGA1_c13540	0.38	+1.3
1,400,584	-		PGA1_c13540	0.44	-0.2
1,400,635	-		PGA1_c13540	0.55	-0.2
1,400,677	-		PGA1_c13540	0.64	+0.5
1,400,688	-		PGA1_c13540	0.66	+0.3
1,400,724	+		PGA1_c13540	0.74	-0.9
1,400,768	+		PGA1_c13540	0.83	-0.3
1,400,776	-		PGA1_c13540	0.84	+1.2
1,400,776	-		PGA1_c13540	0.84	+1.7
1,400,778	+		PGA1_c13540	0.85	+0.8
1,400,781	-		PGA1_c13540	0.86	+1.0
1,400,783	+		PGA1_c13540	0.86	+1.0
1,400,783	+		PGA1_c13540	0.86	+1.6
1,400,786	-		PGA1_c13540	0.87	+0.3
1,400,786	-		PGA1_c13540	0.87	+0.6
1,400,786	-		PGA1_c13540	0.87	+0.7
1,400,786	-		PGA1_c13540	0.87	+0.7
1,400,793	+		PGA1_c13540	0.88	+0.0
1,400,793	+		PGA1_c13540	0.88	+0.4
1,400,793	+		PGA1_c13540	0.88	+0.6
1,400,793	+		PGA1_c13540	0.88	+0.8
1,400,793	+		PGA1_c13540	0.88	+2.5
1,400,793	+		PGA1_c13540	0.88	+1.2
1,400,801	-		PGA1_c13540	0.90	+0.5
1,400,801	-		PGA1_c13540	0.90	+0.2
1,400,801	-		PGA1_c13540	0.90	+0.8
1,400,801	-		PGA1_c13540	0.90	+1.5
1,400,806	-				-0.8
1,400,806	-				+0.6
1,400,851	+				+1.1
1,400,856	+				+0.2
1,400,857	+				+1.2
1,400,857	+				+1.4
1,400,858	+				+0.3
1,400,858	+				+1.0
1,400,858	+				-0.0
1,400,858	+				+1.0
1,400,858	+				-0.3
1,400,864	+				+0.5
1,400,865	-				+1.0
1,400,865	-				+2.4
1,400,866	-				+0.7
1,400,914	+				+0.8
1,400,957	-				-0.5
1,400,961	+				-0.7
1,400,963	-				-2.0
1,400,963	-				+0.4
1,400,983	+				-0.1
1,400,983	+				+0.1
1,400,986	+				+0.8
1,400,991	-				+0.8
1,400,999	-				+1.3
1,400,999	-				+0.3
1,401,016	-				-0.8
1,401,060	-				-0.4
1,401,079	+				-0.5
1,401,104	+				-1.0
1,401,104	+				-2.5
1,401,104	+				+0.5
1,401,104	+				-0.3
1,401,104	+				-1.0
1,401,112	-				-0.0
1,401,112	-				-0.2
1,401,112	-				-0.3
1,401,112	-				+0.9
1,401,112	-				-0.0
1,401,112	-				+1.0
1,401,114	+				-1.6
1,401,139	+		PGA1_c13550	0.12	-0.0
1,401,157	-		PGA1_c13550	0.13	-0.5
1,401,183	-		PGA1_c13550	0.15	-1.6
1,401,185	+		PGA1_c13550	0.15	+0.5
1,401,211	-		PGA1_c13550	0.17	+1.0
1,401,250	+		PGA1_c13550	0.20	+1.1
1,401,253	-		PGA1_c13550	0.21	-0.6
1,401,253	-		PGA1_c13550	0.21	-0.2
1,401,271	-		PGA1_c13550	0.22	+1.0
1,401,439	+		PGA1_c13550	0.35	-0.3
1,401,484	+		PGA1_c13550	0.38	-0.5
1,401,507	-		PGA1_c13550	0.40	-1.2
1,401,513	+		PGA1_c13550	0.41	+0.2
1,401,519	+		PGA1_c13550	0.41	+0.5
1,401,527	-		PGA1_c13550	0.42	+1.0
1,401,527	-		PGA1_c13550	0.42	+0.2
1,401,632	+		PGA1_c13550	0.50	-0.2
1,401,648	+		PGA1_c13550	0.51	+0.3
1,401,656	+		PGA1_c13550	0.52	-0.6
1,401,666	+		PGA1_c13550	0.52	-0.8
1,401,829	-		PGA1_c13550	0.65	-2.2