Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26770 and BWI76_RS26775 overlap by 19 nucleotides BWI76_RS26775 and BWI76_RS26780 are separated by 3 nucleotides
BWI76_RS26770: BWI76_RS26770 - cellulose biosynthesis protein BcsC, at 5,546,375 to 5,549,860
_RS26770
BWI76_RS26775: BWI76_RS26775 - endo-1,4-D-glucanase, at 5,549,842 to 5,550,951
_RS26775
BWI76_RS26780: BWI76_RS26780 - cellulose synthase regulator BcsB, at 5,550,955 to 5,553,288
_RS26780
Position (kb) 5549
5550
5551 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5548.917 kb on + strand, within BWI76_RS26770 at 5548.917 kb on + strand, within BWI76_RS26770 at 5548.925 kb on - strand, within BWI76_RS26770 at 5549.185 kb on - strand, within BWI76_RS26770 at 5549.567 kb on - strand at 5549.668 kb on + strand at 5549.771 kb on + strand at 5549.832 kb on - strand at 5549.938 kb on + strand at 5549.961 kb on - strand, within BWI76_RS26775 at 5550.115 kb on + strand, within BWI76_RS26775 at 5550.227 kb on - strand, within BWI76_RS26775 at 5550.407 kb on - strand, within BWI76_RS26775 at 5550.585 kb on - strand, within BWI76_RS26775 at 5550.594 kb on + strand, within BWI76_RS26775 at 5550.627 kb on - strand, within BWI76_RS26775 at 5550.637 kb on - strand, within BWI76_RS26775 at 5550.639 kb on - strand, within BWI76_RS26775 at 5550.726 kb on + strand, within BWI76_RS26775 at 5550.763 kb on + strand, within BWI76_RS26775 at 5550.768 kb on + strand, within BWI76_RS26775 at 5550.887 kb on + strand at 5551.134 kb on + strand at 5551.540 kb on - strand, within BWI76_RS26780 at 5551.766 kb on + strand, within BWI76_RS26780 at 5551.771 kb on + strand, within BWI76_RS26780 at 5551.771 kb on + strand, within BWI76_RS26780 at 5551.779 kb on - strand, within BWI76_RS26780 at 5551.779 kb on - strand, within BWI76_RS26780 at 5551.790 kb on + strand, within BWI76_RS26780 at 5551.790 kb on + strand, within BWI76_RS26780 at 5551.798 kb on - strand, within BWI76_RS26780 at 5551.940 kb on + strand, within BWI76_RS26780
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 5,548,917 + BWI76_RS26770 0.73 +0.2 5,548,917 + BWI76_RS26770 0.73 +1.0 5,548,925 - BWI76_RS26770 0.73 -0.6 5,549,185 - BWI76_RS26770 0.81 -0.3 5,549,567 - +0.7 5,549,668 + +0.2 5,549,771 + +0.8 5,549,832 - +2.7 5,549,938 + -1.8 5,549,961 - BWI76_RS26775 0.11 +0.1 5,550,115 + BWI76_RS26775 0.25 -1.6 5,550,227 - BWI76_RS26775 0.35 +0.2 5,550,407 - BWI76_RS26775 0.51 -1.3 5,550,585 - BWI76_RS26775 0.67 -2.2 5,550,594 + BWI76_RS26775 0.68 +2.2 5,550,627 - BWI76_RS26775 0.71 +1.2 5,550,637 - BWI76_RS26775 0.72 +0.4 5,550,639 - BWI76_RS26775 0.72 -0.6 5,550,726 + BWI76_RS26775 0.80 +0.2 5,550,763 + BWI76_RS26775 0.83 -1.5 5,550,768 + BWI76_RS26775 0.83 -1.0 5,550,887 + -3.0 5,551,134 + +0.4 5,551,540 - BWI76_RS26780 0.25 -0.3 5,551,766 + BWI76_RS26780 0.35 +0.4 5,551,771 + BWI76_RS26780 0.35 +0.1 5,551,771 + BWI76_RS26780 0.35 -0.0 5,551,779 - BWI76_RS26780 0.35 -0.1 5,551,779 - BWI76_RS26780 0.35 +0.4 5,551,790 + BWI76_RS26780 0.36 +0.9 5,551,790 + BWI76_RS26780 0.36 -0.2 5,551,798 - BWI76_RS26780 0.36 +0.3 5,551,940 + BWI76_RS26780 0.42 +1.0
Or see this region's nucleotide sequence