Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS25910 and BWI76_RS25915 are separated by 222 nucleotides BWI76_RS25915 and BWI76_RS25920 are separated by 59 nucleotides BWI76_RS25920 and BWI76_RS25925 are separated by 94 nucleotides BWI76_RS25925 and BWI76_RS25930 are separated by 11 nucleotides
BWI76_RS25910: BWI76_RS25910 - peptidyl-prolyl cis-trans isomerase, at 5,358,128 to 5,358,946
_RS25910
BWI76_RS25915: BWI76_RS25915 - protein SlyX, at 5,359,169 to 5,359,387
_RS25915
BWI76_RS25920: BWI76_RS25920 - peptidylprolyl isomerase, at 5,359,447 to 5,360,034
_RS25920
BWI76_RS25925: BWI76_RS25925 - hypothetical protein, at 5,360,129 to 5,360,329
_RS25925
BWI76_RS25930: BWI76_RS25930 - glutathione-regulated potassium-efflux system protein KefB, at 5,360,341 to 5,362,146
_RS25930
Position (kb) 5359
5360
5361 Strain fitness (log2 ratio) -2
-1
0
1 at 5358.507 kb on + strand, within BWI76_RS25910 at 5358.607 kb on - strand, within BWI76_RS25910 at 5358.886 kb on - strand at 5358.953 kb on + strand at 5358.982 kb on - strand at 5359.006 kb on + strand at 5359.014 kb on - strand at 5359.052 kb on - strand at 5359.100 kb on + strand at 5359.146 kb on + strand at 5359.154 kb on - strand at 5359.154 kb on - strand at 5359.154 kb on - strand at 5359.194 kb on + strand, within BWI76_RS25915 at 5359.210 kb on - strand, within BWI76_RS25915 at 5359.329 kb on + strand, within BWI76_RS25915 at 5359.521 kb on - strand, within BWI76_RS25920 at 5359.585 kb on + strand, within BWI76_RS25920 at 5359.835 kb on - strand, within BWI76_RS25920 at 5359.993 kb on - strand at 5360.185 kb on + strand, within BWI76_RS25925 at 5360.254 kb on - strand, within BWI76_RS25925 at 5360.278 kb on - strand, within BWI76_RS25925 at 5360.425 kb on - strand at 5360.450 kb on - strand at 5360.628 kb on + strand, within BWI76_RS25930 at 5360.703 kb on - strand, within BWI76_RS25930
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 5,358,507 + BWI76_RS25910 0.46 +0.3 5,358,607 - BWI76_RS25910 0.58 +0.3 5,358,886 - -1.9 5,358,953 + -1.1 5,358,982 - -0.5 5,359,006 + +1.2 5,359,014 - -0.3 5,359,052 - -0.4 5,359,100 + +0.0 5,359,146 + -1.2 5,359,154 - -0.7 5,359,154 - -0.8 5,359,154 - +0.4 5,359,194 + BWI76_RS25915 0.11 -0.4 5,359,210 - BWI76_RS25915 0.19 +0.2 5,359,329 + BWI76_RS25915 0.73 -0.3 5,359,521 - BWI76_RS25920 0.13 -0.2 5,359,585 + BWI76_RS25920 0.23 -0.9 5,359,835 - BWI76_RS25920 0.66 -1.1 5,359,993 - +0.1 5,360,185 + BWI76_RS25925 0.28 +0.3 5,360,254 - BWI76_RS25925 0.62 +0.3 5,360,278 - BWI76_RS25925 0.74 -0.6 5,360,425 - +0.0 5,360,450 - +0.5 5,360,628 + BWI76_RS25930 0.16 -1.5 5,360,703 - BWI76_RS25930 0.20 +0.5
Or see this region's nucleotide sequence