Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24670

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24665 and BWI76_RS24670 are separated by 37 nucleotidesBWI76_RS24670 and BWI76_RS24675 are separated by 219 nucleotides BWI76_RS24665: BWI76_RS24665 - LsrR family transcriptional regulator, at 5,140,733 to 5,141,704 _RS24665 BWI76_RS24670: BWI76_RS24670 - autoinducer-2 kinase, at 5,141,742 to 5,143,334 _RS24670 BWI76_RS24675: BWI76_RS24675 - NADPH-dependent 2,4-dienoyl-CoA reductase, at 5,143,554 to 5,145,575 _RS24675 Position (kb) 5141 5142 5143 5144Strain fitness (log2 ratio) -1 0 1 2at 5140.846 kb on + strand, within BWI76_RS24665at 5140.846 kb on - strand, within BWI76_RS24665at 5141.088 kb on + strand, within BWI76_RS24665at 5141.126 kb on + strand, within BWI76_RS24665at 5141.143 kb on + strand, within BWI76_RS24665at 5141.438 kb on + strand, within BWI76_RS24665at 5141.707 kb on + strandat 5141.707 kb on + strandat 5141.707 kb on + strandat 5141.948 kb on - strand, within BWI76_RS24670at 5142.253 kb on - strand, within BWI76_RS24670at 5142.313 kb on - strand, within BWI76_RS24670at 5142.335 kb on + strand, within BWI76_RS24670at 5142.541 kb on + strand, within BWI76_RS24670at 5142.859 kb on - strand, within BWI76_RS24670at 5142.885 kb on + strand, within BWI76_RS24670at 5143.057 kb on + strand, within BWI76_RS24670at 5143.121 kb on + strand, within BWI76_RS24670at 5143.329 kb on + strandat 5143.329 kb on + strandat 5143.337 kb on - strandat 5143.337 kb on - strandat 5143.337 kb on - strandat 5143.337 kb on - strandat 5143.776 kb on + strand, within BWI76_RS24675at 5143.784 kb on - strand, within BWI76_RS24675at 5143.786 kb on - strand, within BWI76_RS24675at 5143.836 kb on - strand, within BWI76_RS24675at 5144.150 kb on + strand, within BWI76_RS24675at 5144.158 kb on - strand, within BWI76_RS24675

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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5,140,846 + BWI76_RS24665 0.12 +0.7
5,140,846 - BWI76_RS24665 0.12 +1.3
5,141,088 + BWI76_RS24665 0.37 -0.3
5,141,126 + BWI76_RS24665 0.40 -0.2
5,141,143 + BWI76_RS24665 0.42 +0.9
5,141,438 + BWI76_RS24665 0.73 -0.6
5,141,707 + +0.1
5,141,707 + +0.5
5,141,707 + +0.0
5,141,948 - BWI76_RS24670 0.13 +0.5
5,142,253 - BWI76_RS24670 0.32 +0.4
5,142,313 - BWI76_RS24670 0.36 -0.3
5,142,335 + BWI76_RS24670 0.37 +1.0
5,142,541 + BWI76_RS24670 0.50 +2.1
5,142,859 - BWI76_RS24670 0.70 +0.1
5,142,885 + BWI76_RS24670 0.72 +0.2
5,143,057 + BWI76_RS24670 0.83 +2.1
5,143,121 + BWI76_RS24670 0.87 +0.7
5,143,329 + -0.2
5,143,329 + +1.3
5,143,337 - +0.8
5,143,337 - +0.9
5,143,337 - +0.8
5,143,337 - +0.1
5,143,776 + BWI76_RS24675 0.11 +0.2
5,143,784 - BWI76_RS24675 0.11 -0.1
5,143,786 - BWI76_RS24675 0.11 +0.8
5,143,836 - BWI76_RS24675 0.14 +0.5
5,144,150 + BWI76_RS24675 0.29 +0.5
5,144,158 - BWI76_RS24675 0.30 +0.9

Or see this region's nucleotide sequence