Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24480 and BWI76_RS24485 are separated by 203 nucleotides BWI76_RS24485 and BWI76_RS24490 are separated by 212 nucleotides
BWI76_RS24480: BWI76_RS24480 - undecaprenyl-diphosphatase, at 5,105,680 to 5,106,501
_RS24480
BWI76_RS24485: BWI76_RS24485 - bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase, at 5,106,705 to 5,107,088
_RS24485
BWI76_RS24490: BWI76_RS24490 - glycerol-3-phosphate acyltransferase, at 5,107,301 to 5,107,921
_RS24490
Position (kb) 5106
5107
5108 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5105.858 kb on - strand, within BWI76_RS24480 at 5105.866 kb on - strand, within BWI76_RS24480 at 5106.152 kb on + strand, within BWI76_RS24480 at 5106.205 kb on - strand, within BWI76_RS24480 at 5106.235 kb on - strand, within BWI76_RS24480 at 5106.244 kb on + strand, within BWI76_RS24480 at 5106.252 kb on - strand, within BWI76_RS24480 at 5106.252 kb on - strand, within BWI76_RS24480 at 5106.258 kb on - strand, within BWI76_RS24480 at 5106.414 kb on + strand, within BWI76_RS24480 at 5106.419 kb on + strand at 5106.419 kb on + strand at 5106.419 kb on + strand at 5106.422 kb on - strand at 5106.439 kb on - strand at 5106.479 kb on + strand at 5106.481 kb on - strand at 5106.576 kb on + strand at 5106.584 kb on - strand at 5106.605 kb on + strand at 5106.696 kb on - strand at 5106.719 kb on - strand at 5106.737 kb on + strand at 5106.745 kb on - strand, within BWI76_RS24485 at 5107.147 kb on + strand at 5107.203 kb on + strand at 5107.217 kb on - strand at 5107.224 kb on + strand at 5107.224 kb on + strand at 5107.232 kb on - strand at 5107.253 kb on - strand at 5107.268 kb on + strand at 5107.322 kb on - strand at 5107.577 kb on + strand, within BWI76_RS24490 at 5107.656 kb on + strand, within BWI76_RS24490 at 5107.716 kb on + strand, within BWI76_RS24490 at 5107.736 kb on - strand, within BWI76_RS24490 at 5107.764 kb on - strand, within BWI76_RS24490 at 5107.764 kb on - strand, within BWI76_RS24490 at 5107.764 kb on - strand, within BWI76_RS24490 at 5107.771 kb on + strand at 5107.951 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 5,105,858 - BWI76_RS24480 0.22 +0.0 5,105,866 - BWI76_RS24480 0.23 -0.1 5,106,152 + BWI76_RS24480 0.57 -0.3 5,106,205 - BWI76_RS24480 0.64 +0.8 5,106,235 - BWI76_RS24480 0.68 -2.0 5,106,244 + BWI76_RS24480 0.69 +0.8 5,106,252 - BWI76_RS24480 0.70 -1.0 5,106,252 - BWI76_RS24480 0.70 +0.1 5,106,258 - BWI76_RS24480 0.70 +0.3 5,106,414 + BWI76_RS24480 0.89 -0.1 5,106,419 + +0.1 5,106,419 + +0.4 5,106,419 + +0.1 5,106,422 - -0.2 5,106,439 - +0.1 5,106,479 + +1.4 5,106,481 - +0.1 5,106,576 + +0.6 5,106,584 - -0.2 5,106,605 + -0.8 5,106,696 - -0.3 5,106,719 - -2.0 5,106,737 + -0.3 5,106,745 - BWI76_RS24485 0.10 -1.0 5,107,147 + -2.2 5,107,203 + -1.1 5,107,217 - +1.2 5,107,224 + +0.0 5,107,224 + +2.5 5,107,232 - +1.7 5,107,253 - +0.3 5,107,268 + -0.3 5,107,322 - -0.1 5,107,577 + BWI76_RS24490 0.44 -0.0 5,107,656 + BWI76_RS24490 0.57 +0.4 5,107,716 + BWI76_RS24490 0.67 -0.5 5,107,736 - BWI76_RS24490 0.70 -2.7 5,107,764 - BWI76_RS24490 0.75 +0.5 5,107,764 - BWI76_RS24490 0.75 +0.7 5,107,764 - BWI76_RS24490 0.75 +0.7 5,107,771 + -1.1 5,107,951 - -1.0
Or see this region's nucleotide sequence