Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS24120

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS24105 and BWI76_RS24110 overlap by 4 nucleotidesBWI76_RS24110 and BWI76_RS24115 are separated by 12 nucleotidesBWI76_RS24115 and BWI76_RS24120 overlap by 8 nucleotidesBWI76_RS24120 and BWI76_RS24125 are separated by 304 nucleotides BWI76_RS24105: BWI76_RS24105 - resistance protein, at 5,028,208 to 5,028,774 _RS24105 BWI76_RS24110: BWI76_RS24110 - YggU family protein, at 5,028,771 to 5,029,061 _RS24110 BWI76_RS24115: BWI76_RS24115 - non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family, at 5,029,074 to 5,029,667 _RS24115 BWI76_RS24120: BWI76_RS24120 - YggW family oxidoreductase, at 5,029,660 to 5,030,796 _RS24120 BWI76_RS24125: BWI76_RS24125 - hypothetical protein, at 5,031,101 to 5,032,087 _RS24125 Position (kb) 5029 5030 5031Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 5028.723 kb on + strandat 5028.759 kb on + strandat 5028.824 kb on + strand, within BWI76_RS24110at 5028.824 kb on + strand, within BWI76_RS24110at 5029.038 kb on - strandat 5029.292 kb on - strand, within BWI76_RS24115at 5029.422 kb on + strand, within BWI76_RS24115at 5029.461 kb on + strand, within BWI76_RS24115at 5029.584 kb on + strand, within BWI76_RS24115at 5029.592 kb on - strand, within BWI76_RS24115at 5029.592 kb on - strand, within BWI76_RS24115at 5029.592 kb on - strand, within BWI76_RS24115at 5029.819 kb on - strand, within BWI76_RS24120at 5030.128 kb on - strand, within BWI76_RS24120at 5030.128 kb on - strand, within BWI76_RS24120at 5030.242 kb on + strand, within BWI76_RS24120at 5030.282 kb on + strand, within BWI76_RS24120at 5030.330 kb on + strandat 5030.338 kb on - strand, within BWI76_RS24120at 5030.486 kb on + strand, within BWI76_RS24120at 5030.518 kb on - strandat 5030.621 kb on - strand, within BWI76_RS24120at 5030.654 kb on + strand, within BWI76_RS24120at 5030.662 kb on - strand, within BWI76_RS24120at 5030.722 kb on - strandat 5030.756 kb on - strandat 5030.787 kb on - strandat 5030.789 kb on - strandat 5030.793 kb on + strandat 5030.809 kb on - strandat 5030.809 kb on - strandat 5031.003 kb on + strandat 5031.011 kb on - strandat 5031.026 kb on + strandat 5031.064 kb on - strandat 5031.133 kb on + strandat 5031.133 kb on - strandat 5031.159 kb on + strandat 5031.203 kb on + strand, within BWI76_RS24125at 5031.207 kb on + strand, within BWI76_RS24125at 5031.237 kb on + strandat 5031.317 kb on - strand, within BWI76_RS24125at 5031.332 kb on + strandat 5031.332 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.361 kb on + strand, within BWI76_RS24125at 5031.367 kb on + strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.369 kb on - strand, within BWI76_RS24125at 5031.374 kb on + strand, within BWI76_RS24125at 5031.375 kb on - strand, within BWI76_RS24125at 5031.375 kb on - strand, within BWI76_RS24125at 5031.394 kb on - strand, within BWI76_RS24125at 5031.399 kb on - strand, within BWI76_RS24125at 5031.406 kb on + strand, within BWI76_RS24125at 5031.406 kb on + strand, within BWI76_RS24125at 5031.414 kb on - strand, within BWI76_RS24125at 5031.414 kb on - strand, within BWI76_RS24125at 5031.414 kb on - strand, within BWI76_RS24125at 5031.416 kb on + strand, within BWI76_RS24125at 5031.508 kb on + strand, within BWI76_RS24125at 5031.509 kb on + strand, within BWI76_RS24125at 5031.517 kb on - strand, within BWI76_RS24125at 5031.517 kb on - strand, within BWI76_RS24125at 5031.519 kb on + strand, within BWI76_RS24125at 5031.519 kb on + strand, within BWI76_RS24125at 5031.519 kb on + strand, within BWI76_RS24125at 5031.527 kb on - strand, within BWI76_RS24125at 5031.527 kb on - strand, within BWI76_RS24125at 5031.531 kb on + strand, within BWI76_RS24125at 5031.531 kb on + strand, within BWI76_RS24125at 5031.539 kb on - strand, within BWI76_RS24125at 5031.539 kb on - strand, within BWI76_RS24125at 5031.539 kb on - strand, within BWI76_RS24125at 5031.542 kb on + strand, within BWI76_RS24125at 5031.548 kb on + strand, within BWI76_RS24125at 5031.599 kb on + strand, within BWI76_RS24125at 5031.600 kb on + strand, within BWI76_RS24125at 5031.614 kb on + strand, within BWI76_RS24125at 5031.619 kb on + strand, within BWI76_RS24125at 5031.619 kb on + strand, within BWI76_RS24125at 5031.622 kb on - strand, within BWI76_RS24125at 5031.622 kb on - strand, within BWI76_RS24125at 5031.641 kb on - strandat 5031.641 kb on - strand, within BWI76_RS24125at 5031.641 kb on - strand, within BWI76_RS24125at 5031.651 kb on - strand, within BWI76_RS24125at 5031.696 kb on - strand, within BWI76_RS24125at 5031.713 kb on + strand, within BWI76_RS24125at 5031.779 kb on - strand, within BWI76_RS24125

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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5,028,723 + -0.4
5,028,759 + -1.0
5,028,824 + BWI76_RS24110 0.18 +1.4
5,028,824 + BWI76_RS24110 0.18 -0.6
5,029,038 - +0.6
5,029,292 - BWI76_RS24115 0.37 -0.5
5,029,422 + BWI76_RS24115 0.59 +0.6
5,029,461 + BWI76_RS24115 0.65 -0.0
5,029,584 + BWI76_RS24115 0.86 -0.0
5,029,592 - BWI76_RS24115 0.87 +1.2
5,029,592 - BWI76_RS24115 0.87 +0.6
5,029,592 - BWI76_RS24115 0.87 +0.0
5,029,819 - BWI76_RS24120 0.14 +0.3
5,030,128 - BWI76_RS24120 0.41 -0.5
5,030,128 - BWI76_RS24120 0.41 -0.3
5,030,242 + BWI76_RS24120 0.51 -1.0
5,030,282 + BWI76_RS24120 0.55 -2.2
5,030,330 + +2.1
5,030,338 - BWI76_RS24120 0.60 -2.3
5,030,486 + BWI76_RS24120 0.73 -1.5
5,030,518 - -0.5
5,030,621 - BWI76_RS24120 0.85 -0.3
5,030,654 + BWI76_RS24120 0.87 -1.2
5,030,662 - BWI76_RS24120 0.88 -0.4
5,030,722 - +1.1
5,030,756 - -0.3
5,030,787 - +0.8
5,030,789 - +0.1
5,030,793 + +0.2
5,030,809 - +0.5
5,030,809 - -1.4
5,031,003 + -1.1
5,031,011 - +0.2
5,031,026 + +1.4
5,031,064 - -0.3
5,031,133 + +0.7
5,031,133 - +0.5
5,031,159 + +0.2
5,031,203 + BWI76_RS24125 0.10 +0.3
5,031,207 + BWI76_RS24125 0.11 -0.4
5,031,237 + -1.3
5,031,317 - BWI76_RS24125 0.22 +0.1
5,031,332 + +2.1
5,031,332 + BWI76_RS24125 0.23 -0.0
5,031,361 + BWI76_RS24125 0.26 +1.3
5,031,361 + BWI76_RS24125 0.26 +0.8
5,031,361 + BWI76_RS24125 0.26 +1.0
5,031,361 + BWI76_RS24125 0.26 -0.5
5,031,361 + BWI76_RS24125 0.26 +0.1
5,031,361 + BWI76_RS24125 0.26 -0.4
5,031,361 + BWI76_RS24125 0.26 +0.4
5,031,361 + BWI76_RS24125 0.26 +0.1
5,031,361 + BWI76_RS24125 0.26 +0.2
5,031,361 + BWI76_RS24125 0.26 -0.6
5,031,361 + BWI76_RS24125 0.26 +0.1
5,031,361 + BWI76_RS24125 0.26 +0.4
5,031,361 + BWI76_RS24125 0.26 -0.2
5,031,367 + BWI76_RS24125 0.27 -1.0
5,031,369 - BWI76_RS24125 0.27 +1.3
5,031,369 - BWI76_RS24125 0.27 +0.3
5,031,369 - BWI76_RS24125 0.27 -1.0
5,031,369 - BWI76_RS24125 0.27 +0.8
5,031,369 - BWI76_RS24125 0.27 +2.1
5,031,369 - BWI76_RS24125 0.27 -0.5
5,031,369 - BWI76_RS24125 0.27 -0.6
5,031,369 - BWI76_RS24125 0.27 -1.5
5,031,369 - BWI76_RS24125 0.27 -0.9
5,031,369 - BWI76_RS24125 0.27 +0.2
5,031,369 - BWI76_RS24125 0.27 +0.7
5,031,369 - BWI76_RS24125 0.27 +1.1
5,031,369 - BWI76_RS24125 0.27 -3.2
5,031,369 - BWI76_RS24125 0.27 -0.3
5,031,369 - BWI76_RS24125 0.27 -0.2
5,031,369 - BWI76_RS24125 0.27 +0.6
5,031,369 - BWI76_RS24125 0.27 +2.2
5,031,374 + BWI76_RS24125 0.28 +0.1
5,031,375 - BWI76_RS24125 0.28 +3.1
5,031,375 - BWI76_RS24125 0.28 +2.0
5,031,394 - BWI76_RS24125 0.30 -0.1
5,031,399 - BWI76_RS24125 0.30 +3.1
5,031,406 + BWI76_RS24125 0.31 -0.2
5,031,406 + BWI76_RS24125 0.31 +0.5
5,031,414 - BWI76_RS24125 0.32 +1.2
5,031,414 - BWI76_RS24125 0.32 +0.4
5,031,414 - BWI76_RS24125 0.32 +0.4
5,031,416 + BWI76_RS24125 0.32 +0.2
5,031,508 + BWI76_RS24125 0.41 -0.3
5,031,509 + BWI76_RS24125 0.41 -1.1
5,031,517 - BWI76_RS24125 0.42 +0.7
5,031,517 - BWI76_RS24125 0.42 +1.1
5,031,519 + BWI76_RS24125 0.42 -0.3
5,031,519 + BWI76_RS24125 0.42 +0.4
5,031,519 + BWI76_RS24125 0.42 +2.1
5,031,527 - BWI76_RS24125 0.43 -0.5
5,031,527 - BWI76_RS24125 0.43 -0.3
5,031,531 + BWI76_RS24125 0.44 -0.4
5,031,531 + BWI76_RS24125 0.44 -1.7
5,031,539 - BWI76_RS24125 0.44 -1.3
5,031,539 - BWI76_RS24125 0.44 +1.4
5,031,539 - BWI76_RS24125 0.44 +0.3
5,031,542 + BWI76_RS24125 0.45 +0.1
5,031,548 + BWI76_RS24125 0.45 -0.7
5,031,599 + BWI76_RS24125 0.50 +0.2
5,031,600 + BWI76_RS24125 0.51 +0.1
5,031,614 + BWI76_RS24125 0.52 -0.4
5,031,619 + BWI76_RS24125 0.52 +0.2
5,031,619 + BWI76_RS24125 0.52 -0.5
5,031,622 - BWI76_RS24125 0.53 +2.1
5,031,622 - BWI76_RS24125 0.53 +2.2
5,031,641 - +0.1
5,031,641 - BWI76_RS24125 0.55 -0.1
5,031,641 - BWI76_RS24125 0.55 +0.7
5,031,651 - BWI76_RS24125 0.56 +0.9
5,031,696 - BWI76_RS24125 0.60 -0.0
5,031,713 + BWI76_RS24125 0.62 -1.0
5,031,779 - BWI76_RS24125 0.69 -2.3

Or see this region's nucleotide sequence