Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23220

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23215 and BWI76_RS23220 are separated by 227 nucleotidesBWI76_RS23220 and BWI76_RS23225 are separated by 40 nucleotides BWI76_RS23215: BWI76_RS23215 - N-acetylmuramoyl-L-alanine amidase, at 4,835,600 to 4,836,853 _RS23215 BWI76_RS23220: BWI76_RS23220 - amino-acid N-acetyltransferase, at 4,837,081 to 4,838,412 _RS23220 BWI76_RS23225: BWI76_RS23225 - exonuclease V subunit alpha, at 4,838,453 to 4,840,288 _RS23225 Position (kb) 4837 4838 4839Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 4836.246 kb on + strand, within BWI76_RS23215at 4836.329 kb on + strand, within BWI76_RS23215at 4836.364 kb on - strand, within BWI76_RS23215at 4836.448 kb on + strand, within BWI76_RS23215at 4836.448 kb on + strand, within BWI76_RS23215at 4836.499 kb on + strand, within BWI76_RS23215at 4836.903 kb on + strandat 4836.923 kb on + strandat 4837.004 kb on + strandat 4837.458 kb on - strand, within BWI76_RS23220at 4837.462 kb on - strand, within BWI76_RS23220at 4837.491 kb on + strand, within BWI76_RS23220at 4837.491 kb on + strand, within BWI76_RS23220at 4837.499 kb on - strand, within BWI76_RS23220at 4837.499 kb on - strand, within BWI76_RS23220at 4837.631 kb on + strand, within BWI76_RS23220at 4837.644 kb on - strand, within BWI76_RS23220at 4838.047 kb on - strand, within BWI76_RS23220at 4838.141 kb on - strand, within BWI76_RS23220at 4838.516 kb on + strandat 4838.516 kb on + strandat 4838.561 kb on + strandat 4838.624 kb on - strandat 4838.649 kb on - strand, within BWI76_RS23225at 4838.700 kb on + strand, within BWI76_RS23225at 4839.068 kb on - strand, within BWI76_RS23225at 4839.150 kb on - strand, within BWI76_RS23225at 4839.411 kb on + strand, within BWI76_RS23225

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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4,836,246 + BWI76_RS23215 0.52 +1.2
4,836,329 + BWI76_RS23215 0.58 -0.2
4,836,364 - BWI76_RS23215 0.61 -2.6
4,836,448 + BWI76_RS23215 0.68 -0.5
4,836,448 + BWI76_RS23215 0.68 +0.6
4,836,499 + BWI76_RS23215 0.72 -1.1
4,836,903 + +0.3
4,836,923 + +1.2
4,837,004 + +0.8
4,837,458 - BWI76_RS23220 0.28 -2.9
4,837,462 - BWI76_RS23220 0.29 -5.1
4,837,491 + BWI76_RS23220 0.31 -4.7
4,837,491 + BWI76_RS23220 0.31 -2.5
4,837,499 - BWI76_RS23220 0.31 -4.8
4,837,499 - BWI76_RS23220 0.31 -3.1
4,837,631 + BWI76_RS23220 0.41 -2.8
4,837,644 - BWI76_RS23220 0.42 -3.7
4,838,047 - BWI76_RS23220 0.73 -3.2
4,838,141 - BWI76_RS23220 0.80 -4.7
4,838,516 + -0.2
4,838,516 + -1.0
4,838,561 + +1.1
4,838,624 - -1.0
4,838,649 - BWI76_RS23225 0.11 -0.4
4,838,700 + BWI76_RS23225 0.13 -0.4
4,839,068 - BWI76_RS23225 0.33 +1.3
4,839,150 - BWI76_RS23225 0.38 -0.1
4,839,411 + BWI76_RS23225 0.52 +0.8

Or see this region's nucleotide sequence