Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22805

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22800 and BWI76_RS22805 are separated by 59 nucleotidesBWI76_RS22805 and BWI76_RS22810 are separated by 97 nucleotides BWI76_RS22800: BWI76_RS22800 - nucleoside triphosphate pyrophosphohydrolase, at 4,753,900 to 4,754,691 _RS22800 BWI76_RS22805: BWI76_RS22805 - GTP diphosphokinase, at 4,754,751 to 4,756,988 _RS22805 BWI76_RS22810: BWI76_RS22810 - 23S rRNA (uracil(1939)-C(5))-methyltransferase, at 4,757,086 to 4,758,429 _RS22810 Position (kb) 4754 4755 4756 4757Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 4753.793 kb on + strandat 4753.793 kb on + strandat 4753.964 kb on - strandat 4754.343 kb on + strand, within BWI76_RS22800at 4754.483 kb on + strand, within BWI76_RS22800at 4754.495 kb on + strand, within BWI76_RS22800at 4754.495 kb on + strand, within BWI76_RS22800at 4754.512 kb on + strand, within BWI76_RS22800at 4754.563 kb on - strand, within BWI76_RS22800at 4754.565 kb on + strand, within BWI76_RS22800at 4754.573 kb on - strand, within BWI76_RS22800at 4754.648 kb on + strandat 4754.666 kb on - strandat 4754.825 kb on - strandat 4754.982 kb on - strand, within BWI76_RS22805at 4755.009 kb on - strand, within BWI76_RS22805at 4755.251 kb on + strand, within BWI76_RS22805at 4755.293 kb on - strand, within BWI76_RS22805at 4755.422 kb on - strand, within BWI76_RS22805at 4755.424 kb on + strand, within BWI76_RS22805at 4755.461 kb on - strand, within BWI76_RS22805at 4755.696 kb on - strand, within BWI76_RS22805at 4755.724 kb on - strand, within BWI76_RS22805at 4756.100 kb on + strand, within BWI76_RS22805at 4756.264 kb on + strand, within BWI76_RS22805at 4756.303 kb on + strand, within BWI76_RS22805at 4756.410 kb on - strand, within BWI76_RS22805at 4756.531 kb on + strand, within BWI76_RS22805at 4756.598 kb on + strand, within BWI76_RS22805at 4756.598 kb on + strand, within BWI76_RS22805at 4756.606 kb on - strand, within BWI76_RS22805at 4756.661 kb on - strand, within BWI76_RS22805at 4756.663 kb on + strand, within BWI76_RS22805at 4756.746 kb on - strand, within BWI76_RS22805at 4756.775 kb on - strandat 4756.997 kb on + strandat 4756.997 kb on + strandat 4756.997 kb on + strandat 4757.003 kb on - strandat 4757.005 kb on - strandat 4757.005 kb on - strandat 4757.005 kb on - strandat 4757.005 kb on - strandat 4757.042 kb on + strandat 4757.042 kb on - strandat 4757.531 kb on + strand, within BWI76_RS22810at 4757.637 kb on + strand, within BWI76_RS22810at 4757.673 kb on + strand, within BWI76_RS22810at 4757.689 kb on + strand, within BWI76_RS22810at 4757.945 kb on - strand, within BWI76_RS22810

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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4,753,793 + +1.1
4,753,793 + +0.5
4,753,964 - +1.1
4,754,343 + BWI76_RS22800 0.56 -0.2
4,754,483 + BWI76_RS22800 0.74 -0.1
4,754,495 + BWI76_RS22800 0.75 -0.4
4,754,495 + BWI76_RS22800 0.75 -0.1
4,754,512 + BWI76_RS22800 0.77 -0.6
4,754,563 - BWI76_RS22800 0.84 -1.0
4,754,565 + BWI76_RS22800 0.84 -0.1
4,754,573 - BWI76_RS22800 0.85 -0.4
4,754,648 + -0.6
4,754,666 - -0.1
4,754,825 - -0.7
4,754,982 - BWI76_RS22805 0.10 -1.3
4,755,009 - BWI76_RS22805 0.12 -2.9
4,755,251 + BWI76_RS22805 0.22 -2.8
4,755,293 - BWI76_RS22805 0.24 -2.1
4,755,422 - BWI76_RS22805 0.30 -4.4
4,755,424 + BWI76_RS22805 0.30 -2.7
4,755,461 - BWI76_RS22805 0.32 -1.8
4,755,696 - BWI76_RS22805 0.42 -2.9
4,755,724 - BWI76_RS22805 0.43 -1.4
4,756,100 + BWI76_RS22805 0.60 -2.4
4,756,264 + BWI76_RS22805 0.68 -4.2
4,756,303 + BWI76_RS22805 0.69 -3.0
4,756,410 - BWI76_RS22805 0.74 -5.2
4,756,531 + BWI76_RS22805 0.80 -1.6
4,756,598 + BWI76_RS22805 0.83 -3.3
4,756,598 + BWI76_RS22805 0.83 -1.7
4,756,606 - BWI76_RS22805 0.83 -4.3
4,756,661 - BWI76_RS22805 0.85 -3.6
4,756,663 + BWI76_RS22805 0.85 -1.0
4,756,746 - BWI76_RS22805 0.89 -3.8
4,756,775 - -6.3
4,756,997 + -2.0
4,756,997 + -1.8
4,756,997 + +0.1
4,757,003 - -0.1
4,757,005 - -2.1
4,757,005 - +0.4
4,757,005 - +0.1
4,757,005 - -0.2
4,757,042 + -2.7
4,757,042 - +0.5
4,757,531 + BWI76_RS22810 0.33 -1.2
4,757,637 + BWI76_RS22810 0.41 -0.7
4,757,673 + BWI76_RS22810 0.44 -0.4
4,757,689 + BWI76_RS22810 0.45 -0.9
4,757,945 - BWI76_RS22810 0.64 +1.1

Or see this region's nucleotide sequence