Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22765

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22760 and BWI76_RS22765 overlap by 1 nucleotidesBWI76_RS22765 and BWI76_RS22770 are separated by 346 nucleotidesBWI76_RS22770 and BWI76_RS22775 overlap by 72 nucleotidesBWI76_RS22775 and BWI76_RS22780 are separated by 56 nucleotides BWI76_RS22760: BWI76_RS22760 - sulfite reductase subunit beta, at 4,743,981 to 4,745,693 _RS22760 BWI76_RS22765: BWI76_RS22765 - sulfite reductase subunit alpha, at 4,745,693 to 4,747,492 _RS22765 BWI76_RS22770: BWI76_RS22770 - 6-pyruvoyl tetrahydrobiopterin synthase, at 4,747,839 to 4,748,000 _RS22770 BWI76_RS22775: BWI76_RS22775 - 6-carboxytetrahydropterin synthase QueD, at 4,747,929 to 4,748,291 _RS22775 BWI76_RS22780: BWI76_RS22780 - 7-carboxy-7-deazaguanine synthase QueE, at 4,748,348 to 4,749,019 _RS22780 Position (kb) 4745 4746 4747 4748Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 4744.793 kb on + strand, within BWI76_RS22760at 4744.849 kb on - strand, within BWI76_RS22760at 4744.986 kb on + strand, within BWI76_RS22760at 4744.994 kb on - strand, within BWI76_RS22760at 4745.176 kb on + strand, within BWI76_RS22760at 4745.206 kb on - strand, within BWI76_RS22760at 4745.419 kb on - strand, within BWI76_RS22760at 4745.419 kb on - strand, within BWI76_RS22760at 4745.610 kb on - strandat 4745.659 kb on - strandat 4745.752 kb on + strandat 4745.942 kb on + strand, within BWI76_RS22765at 4745.945 kb on - strandat 4746.044 kb on + strand, within BWI76_RS22765at 4746.284 kb on + strand, within BWI76_RS22765at 4746.485 kb on + strand, within BWI76_RS22765at 4746.485 kb on + strand, within BWI76_RS22765at 4746.485 kb on + strand, within BWI76_RS22765at 4746.492 kb on - strand, within BWI76_RS22765at 4746.503 kb on - strand, within BWI76_RS22765at 4746.553 kb on - strand, within BWI76_RS22765at 4746.626 kb on + strand, within BWI76_RS22765at 4746.691 kb on + strand, within BWI76_RS22765at 4746.694 kb on - strand, within BWI76_RS22765at 4746.699 kb on - strand, within BWI76_RS22765at 4746.780 kb on - strand, within BWI76_RS22765at 4747.131 kb on - strand, within BWI76_RS22765at 4747.134 kb on - strand, within BWI76_RS22765at 4747.136 kb on - strand, within BWI76_RS22765at 4747.136 kb on - strand, within BWI76_RS22765at 4747.146 kb on - strand, within BWI76_RS22765at 4747.218 kb on - strand, within BWI76_RS22765at 4747.324 kb on + strandat 4747.332 kb on - strandat 4747.376 kb on - strandat 4747.376 kb on - strandat 4747.498 kb on + strandat 4747.519 kb on - strandat 4747.612 kb on + strandat 4747.612 kb on + strandat 4747.612 kb on + strandat 4747.613 kb on - strandat 4747.620 kb on - strandat 4747.620 kb on - strandat 4747.620 kb on - strandat 4747.620 kb on - strandat 4747.677 kb on + strandat 4747.692 kb on - strandat 4747.943 kb on + strandat 4747.943 kb on + strandat 4747.943 kb on + strandat 4747.957 kb on + strandat 4747.968 kb on + strandat 4748.026 kb on + strand, within BWI76_RS22775at 4748.096 kb on + strand, within BWI76_RS22775at 4748.096 kb on + strand, within BWI76_RS22775at 4748.165 kb on + strand, within BWI76_RS22775at 4748.187 kb on - strand, within BWI76_RS22775at 4748.330 kb on - strandat 4748.401 kb on - strandat 4748.468 kb on - strand, within BWI76_RS22780

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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4,744,793 + BWI76_RS22760 0.47 -2.7
4,744,849 - BWI76_RS22760 0.51 -0.8
4,744,986 + BWI76_RS22760 0.59 -3.6
4,744,994 - BWI76_RS22760 0.59 +0.9
4,745,176 + BWI76_RS22760 0.70 -4.9
4,745,206 - BWI76_RS22760 0.72 -2.1
4,745,419 - BWI76_RS22760 0.84 -2.7
4,745,419 - BWI76_RS22760 0.84 -2.9
4,745,610 - -1.4
4,745,659 - -2.7
4,745,752 + -4.0
4,745,942 + BWI76_RS22765 0.14 -3.6
4,745,945 - +0.4
4,746,044 + BWI76_RS22765 0.20 -5.8
4,746,284 + BWI76_RS22765 0.33 -0.7
4,746,485 + BWI76_RS22765 0.44 +0.0
4,746,485 + BWI76_RS22765 0.44 -1.6
4,746,485 + BWI76_RS22765 0.44 -1.6
4,746,492 - BWI76_RS22765 0.44 -1.0
4,746,503 - BWI76_RS22765 0.45 -2.6
4,746,553 - BWI76_RS22765 0.48 -2.1
4,746,626 + BWI76_RS22765 0.52 -2.3
4,746,691 + BWI76_RS22765 0.55 -5.1
4,746,694 - BWI76_RS22765 0.56 -1.6
4,746,699 - BWI76_RS22765 0.56 -2.9
4,746,780 - BWI76_RS22765 0.60 -4.3
4,747,131 - BWI76_RS22765 0.80 +0.3
4,747,134 - BWI76_RS22765 0.80 -5.1
4,747,136 - BWI76_RS22765 0.80 -4.7
4,747,136 - BWI76_RS22765 0.80 -2.3
4,747,146 - BWI76_RS22765 0.81 -3.9
4,747,218 - BWI76_RS22765 0.85 -2.3
4,747,324 + -3.6
4,747,332 - -1.0
4,747,376 - -2.6
4,747,376 - -2.7
4,747,498 + +0.4
4,747,519 - -0.2
4,747,612 + -2.8
4,747,612 + -1.8
4,747,612 + -3.1
4,747,613 - +0.8
4,747,620 - -0.3
4,747,620 - +0.6
4,747,620 - -0.4
4,747,620 - -0.8
4,747,677 + -3.9
4,747,692 - -0.8
4,747,943 + -0.6
4,747,943 + +0.4
4,747,943 + +0.1
4,747,957 + -0.3
4,747,968 + -0.0
4,748,026 + BWI76_RS22775 0.27 +0.2
4,748,096 + BWI76_RS22775 0.46 +0.6
4,748,096 + BWI76_RS22775 0.46 +0.3
4,748,165 + BWI76_RS22775 0.65 +0.1
4,748,187 - BWI76_RS22775 0.71 -0.6
4,748,330 - -0.2
4,748,401 - +0.1
4,748,468 - BWI76_RS22780 0.18 +0.3

Or see this region's nucleotide sequence