Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22755

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22750 and BWI76_RS22755 are separated by 189 nucleotidesBWI76_RS22755 and BWI76_RS22760 are separated by 99 nucleotides BWI76_RS22750: BWI76_RS22750 - CRISPR-associated helicase/endonuclease Cas3, at 4,740,297 to 4,742,957 _RS22750 BWI76_RS22755: BWI76_RS22755 - phosphoadenosine phosphosulfate reductase, at 4,743,147 to 4,743,881 _RS22755 BWI76_RS22760: BWI76_RS22760 - sulfite reductase subunit beta, at 4,743,981 to 4,745,693 _RS22760 Position (kb) 4743 4744Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 4742.148 kb on - strand, within BWI76_RS22750at 4742.148 kb on - strand, within BWI76_RS22750at 4742.148 kb on - strand, within BWI76_RS22750at 4742.148 kb on - strand, within BWI76_RS22750at 4742.148 kb on - strand, within BWI76_RS22750at 4742.195 kb on + strand, within BWI76_RS22750at 4742.195 kb on + strand, within BWI76_RS22750at 4742.216 kb on + strand, within BWI76_RS22750at 4742.224 kb on - strand, within BWI76_RS22750at 4742.233 kb on + strand, within BWI76_RS22750at 4742.233 kb on + strand, within BWI76_RS22750at 4742.233 kb on + strand, within BWI76_RS22750at 4742.233 kb on + strand, within BWI76_RS22750at 4742.241 kb on - strand, within BWI76_RS22750at 4742.241 kb on - strand, within BWI76_RS22750at 4742.241 kb on - strand, within BWI76_RS22750at 4742.241 kb on - strand, within BWI76_RS22750at 4742.243 kb on + strand, within BWI76_RS22750at 4742.261 kb on + strandat 4742.267 kb on - strand, within BWI76_RS22750at 4742.267 kb on - strand, within BWI76_RS22750at 4742.267 kb on - strand, within BWI76_RS22750at 4742.324 kb on - strand, within BWI76_RS22750at 4742.325 kb on + strand, within BWI76_RS22750at 4742.325 kb on + strand, within BWI76_RS22750at 4742.338 kb on - strand, within BWI76_RS22750at 4742.372 kb on + strand, within BWI76_RS22750at 4742.380 kb on - strand, within BWI76_RS22750at 4742.380 kb on - strand, within BWI76_RS22750at 4742.461 kb on + strandat 4742.461 kb on + strand, within BWI76_RS22750at 4742.461 kb on + strand, within BWI76_RS22750at 4742.461 kb on + strand, within BWI76_RS22750at 4742.461 kb on + strand, within BWI76_RS22750at 4742.461 kb on + strand, within BWI76_RS22750at 4742.461 kb on + strand, within BWI76_RS22750at 4742.461 kb on + strand, within BWI76_RS22750at 4742.469 kb on - strand, within BWI76_RS22750at 4742.469 kb on - strand, within BWI76_RS22750at 4742.469 kb on - strand, within BWI76_RS22750at 4742.469 kb on - strand, within BWI76_RS22750at 4742.469 kb on - strand, within BWI76_RS22750at 4742.469 kb on - strand, within BWI76_RS22750at 4742.469 kb on - strand, within BWI76_RS22750at 4742.472 kb on - strand, within BWI76_RS22750at 4742.500 kb on + strand, within BWI76_RS22750at 4742.516 kb on + strand, within BWI76_RS22750at 4742.527 kb on + strand, within BWI76_RS22750at 4742.527 kb on + strandat 4742.527 kb on + strand, within BWI76_RS22750at 4742.527 kb on + strand, within BWI76_RS22750at 4742.527 kb on + strand, within BWI76_RS22750at 4742.529 kb on + strand, within BWI76_RS22750at 4742.535 kb on - strand, within BWI76_RS22750at 4742.546 kb on + strand, within BWI76_RS22750at 4742.794 kb on - strandat 4742.849 kb on - strandat 4742.849 kb on - strandat 4742.849 kb on - strandat 4742.849 kb on - strandat 4742.881 kb on - strandat 4742.881 kb on - strandat 4742.881 kb on - strandat 4742.881 kb on - strandat 4742.881 kb on - strandat 4742.881 kb on - strandat 4742.882 kb on + strandat 4742.916 kb on + strandat 4742.918 kb on + strandat 4742.918 kb on + strandat 4742.918 kb on + strandat 4743.020 kb on + strandat 4743.130 kb on - strandat 4743.141 kb on - strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.143 kb on + strandat 4743.144 kb on + strandat 4743.144 kb on + strandat 4743.150 kb on + strandat 4743.151 kb on - strandat 4743.151 kb on - strandat 4743.151 kb on - strandat 4743.151 kb on - strandat 4743.151 kb on - strandat 4743.151 kb on - strandat 4743.151 kb on - strandat 4743.151 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.152 kb on - strandat 4743.168 kb on - strandat 4743.179 kb on + strandat 4743.179 kb on + strandat 4743.179 kb on + strandat 4743.180 kb on - strandat 4743.187 kb on - strandat 4743.187 kb on - strandat 4743.187 kb on - strandat 4743.187 kb on - strandat 4743.236 kb on + strand, within BWI76_RS22755at 4743.244 kb on - strand, within BWI76_RS22755at 4743.266 kb on - strand, within BWI76_RS22755at 4743.532 kb on - strand, within BWI76_RS22755at 4743.589 kb on - strand, within BWI76_RS22755at 4743.617 kb on + strand, within BWI76_RS22755at 4743.692 kb on + strand, within BWI76_RS22755at 4743.696 kb on - strand, within BWI76_RS22755at 4743.700 kb on - strand, within BWI76_RS22755at 4743.846 kb on - strandat 4743.868 kb on - strandat 4743.890 kb on + strandat 4743.917 kb on + strandat 4743.937 kb on + strandat 4743.962 kb on + strandat 4743.998 kb on + strandat 4744.061 kb on - strandat 4744.081 kb on - strandat 4744.181 kb on + strand, within BWI76_RS22760at 4744.377 kb on + strand, within BWI76_RS22760at 4744.397 kb on - strand, within BWI76_RS22760at 4744.436 kb on + strand, within BWI76_RS22760at 4744.793 kb on + strand, within BWI76_RS22760at 4744.849 kb on - strand, within BWI76_RS22760

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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4,742,148 - BWI76_RS22750 0.70 +0.2
4,742,148 - BWI76_RS22750 0.70 +0.2
4,742,148 - BWI76_RS22750 0.70 +1.0
4,742,148 - BWI76_RS22750 0.70 +0.5
4,742,148 - BWI76_RS22750 0.70 -0.3
4,742,195 + BWI76_RS22750 0.71 -2.5
4,742,195 + BWI76_RS22750 0.71 +0.5
4,742,216 + BWI76_RS22750 0.72 -1.1
4,742,224 - BWI76_RS22750 0.72 +1.1
4,742,233 + BWI76_RS22750 0.73 +0.4
4,742,233 + BWI76_RS22750 0.73 +0.3
4,742,233 + BWI76_RS22750 0.73 -1.4
4,742,233 + BWI76_RS22750 0.73 -1.4
4,742,241 - BWI76_RS22750 0.73 -1.4
4,742,241 - BWI76_RS22750 0.73 -2.0
4,742,241 - BWI76_RS22750 0.73 +0.7
4,742,241 - BWI76_RS22750 0.73 -0.5
4,742,243 + BWI76_RS22750 0.73 +1.4
4,742,261 + +1.0
4,742,267 - BWI76_RS22750 0.74 -0.1
4,742,267 - BWI76_RS22750 0.74 +0.1
4,742,267 - BWI76_RS22750 0.74 -1.1
4,742,324 - BWI76_RS22750 0.76 -0.7
4,742,325 + BWI76_RS22750 0.76 +0.8
4,742,325 + BWI76_RS22750 0.76 -0.3
4,742,338 - BWI76_RS22750 0.77 -0.9
4,742,372 + BWI76_RS22750 0.78 +1.0
4,742,380 - BWI76_RS22750 0.78 -0.1
4,742,380 - BWI76_RS22750 0.78 -0.3
4,742,461 + +0.0
4,742,461 + BWI76_RS22750 0.81 -1.1
4,742,461 + BWI76_RS22750 0.81 -0.1
4,742,461 + BWI76_RS22750 0.81 -0.3
4,742,461 + BWI76_RS22750 0.81 -0.7
4,742,461 + BWI76_RS22750 0.81 +0.5
4,742,461 + BWI76_RS22750 0.81 -2.2
4,742,461 + BWI76_RS22750 0.81 -1.4
4,742,469 - BWI76_RS22750 0.82 +1.8
4,742,469 - BWI76_RS22750 0.82 -1.6
4,742,469 - BWI76_RS22750 0.82 +0.6
4,742,469 - BWI76_RS22750 0.82 +0.5
4,742,469 - BWI76_RS22750 0.82 +0.3
4,742,469 - BWI76_RS22750 0.82 +0.4
4,742,469 - BWI76_RS22750 0.82 +0.9
4,742,472 - BWI76_RS22750 0.82 +0.5
4,742,500 + BWI76_RS22750 0.83 +0.2
4,742,516 + BWI76_RS22750 0.83 +0.0
4,742,527 + BWI76_RS22750 0.84 -0.6
4,742,527 + +2.0
4,742,527 + BWI76_RS22750 0.84 -0.1
4,742,527 + BWI76_RS22750 0.84 -0.3
4,742,527 + BWI76_RS22750 0.84 +1.3
4,742,529 + BWI76_RS22750 0.84 -1.0
4,742,535 - BWI76_RS22750 0.84 +0.8
4,742,546 + BWI76_RS22750 0.85 +1.4
4,742,794 - +0.1
4,742,849 - -0.2
4,742,849 - -0.3
4,742,849 - -0.8
4,742,849 - -0.6
4,742,881 - +1.4
4,742,881 - -1.6
4,742,881 - +2.0
4,742,881 - -0.6
4,742,881 - -3.8
4,742,881 - +2.0
4,742,882 + -0.3
4,742,916 + -0.1
4,742,918 + -1.9
4,742,918 + -0.3
4,742,918 + +1.8
4,743,020 + +0.4
4,743,130 - -1.0
4,743,141 - +0.2
4,743,143 + -0.4
4,743,143 + +3.3
4,743,143 + -0.3
4,743,143 + -0.2
4,743,143 + +1.0
4,743,143 + -1.1
4,743,143 + -1.4
4,743,143 + -0.6
4,743,143 + +0.3
4,743,143 + +0.6
4,743,144 + +2.3
4,743,144 + -1.5
4,743,150 + -3.8
4,743,151 - -0.5
4,743,151 - +1.5
4,743,151 - -0.6
4,743,151 - -0.4
4,743,151 - -1.0
4,743,151 - -0.7
4,743,151 - -0.3
4,743,151 - -0.1
4,743,152 - -1.7
4,743,152 - -0.5
4,743,152 - +0.0
4,743,152 - -1.8
4,743,152 - +0.0
4,743,152 - -0.5
4,743,152 - +0.5
4,743,152 - +0.8
4,743,152 - +1.8
4,743,152 - +0.1
4,743,168 - -1.3
4,743,179 + -1.8
4,743,179 + -2.1
4,743,179 + -2.1
4,743,180 - -2.1
4,743,187 - -3.8
4,743,187 - -3.4
4,743,187 - -1.4
4,743,187 - -3.4
4,743,236 + BWI76_RS22755 0.12 -1.1
4,743,244 - BWI76_RS22755 0.13 -3.4
4,743,266 - BWI76_RS22755 0.16 -4.5
4,743,532 - BWI76_RS22755 0.52 -3.0
4,743,589 - BWI76_RS22755 0.60 -1.1
4,743,617 + BWI76_RS22755 0.64 -2.1
4,743,692 + BWI76_RS22755 0.74 -2.1
4,743,696 - BWI76_RS22755 0.75 -1.9
4,743,700 - BWI76_RS22755 0.75 -5.1
4,743,846 - -3.4
4,743,868 - -4.6
4,743,890 + -4.5
4,743,917 + -1.6
4,743,937 + -3.3
4,743,962 + -1.6
4,743,998 + -3.9
4,744,061 - -0.9
4,744,081 - -0.9
4,744,181 + BWI76_RS22760 0.12 -3.4
4,744,377 + BWI76_RS22760 0.23 -4.3
4,744,397 - BWI76_RS22760 0.24 -0.9
4,744,436 + BWI76_RS22760 0.27 -2.3
4,744,793 + BWI76_RS22760 0.47 -2.7
4,744,849 - BWI76_RS22760 0.51 -0.8

Or see this region's nucleotide sequence