Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21660 and BWI76_RS21665 are separated by 10 nucleotides BWI76_RS21665 and BWI76_RS21670 overlap by 4 nucleotides BWI76_RS21670 and BWI76_RS21675 are separated by 13 nucleotides BWI76_RS21675 and BWI76_RS21680 are separated by 22 nucleotides BWI76_RS21680 and BWI76_RS21685 are separated by 49 nucleotides BWI76_RS21685 and BWI76_RS21690 are separated by 79 nucleotides
BWI76_RS21660: BWI76_RS21660 - antirestriction protein, at 4,534,182 to 4,534,655
_RS21660
BWI76_RS21665: BWI76_RS21665 - hypothetical protein, at 4,534,666 to 4,534,899
_RS21665
BWI76_RS21670: BWI76_RS21670 - hypothetical protein, at 4,534,896 to 4,535,378
_RS21670
BWI76_RS21675: BWI76_RS21675 - hypothetical protein, at 4,535,392 to 4,535,613
_RS21675
BWI76_RS21680: BWI76_RS21680 - antitoxin of the YeeV-YeeU toxin-antitoxin system, at 4,535,636 to 4,535,995
_RS21680
BWI76_RS21685: BWI76_RS21685 - hypothetical protein, at 4,536,045 to 4,536,419
_RS21685
BWI76_RS21690: BWI76_RS21690 - hypothetical protein, at 4,536,499 to 4,536,819
_RS21690
Position (kb) 4535
4536 Strain fitness (log2 ratio) -1
0
1
2 at 4534.619 kb on + strand at 4534.882 kb on - strand at 4534.942 kb on + strand at 4534.963 kb on - strand, within BWI76_RS21670 at 4535.460 kb on + strand, within BWI76_RS21675 at 4535.587 kb on + strand, within BWI76_RS21675 at 4535.602 kb on + strand at 4535.605 kb on - strand at 4535.882 kb on - strand, within BWI76_RS21680 at 4535.892 kb on + strand, within BWI76_RS21680 at 4535.928 kb on - strand, within BWI76_RS21680 at 4536.044 kb on - strand at 4536.268 kb on - strand, within BWI76_RS21685 at 4536.400 kb on + strand at 4536.401 kb on + strand at 4536.401 kb on + strand at 4536.525 kb on - strand at 4536.588 kb on + strand, within BWI76_RS21690
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 4,534,619 + -0.8 4,534,882 - +1.4 4,534,942 + +0.1 4,534,963 - BWI76_RS21670 0.14 -0.6 4,535,460 + BWI76_RS21675 0.31 -0.3 4,535,587 + BWI76_RS21675 0.88 -1.5 4,535,602 + +0.1 4,535,605 - -0.2 4,535,882 - BWI76_RS21680 0.68 +0.6 4,535,892 + BWI76_RS21680 0.71 +1.9 4,535,928 - BWI76_RS21680 0.81 +0.1 4,536,044 - +0.1 4,536,268 - BWI76_RS21685 0.59 -0.8 4,536,400 + +0.5 4,536,401 + -0.4 4,536,401 + -0.6 4,536,525 - -0.3 4,536,588 + BWI76_RS21690 0.28 -0.6
Or see this region's nucleotide sequence