Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21465 and BWI76_RS21470 overlap by 4 nucleotides BWI76_RS21470 and BWI76_RS21475 are separated by 68 nucleotides BWI76_RS21475 and BWI76_RS21480 are separated by 9 nucleotides
BWI76_RS21465: BWI76_RS21465 - bifunctional chorismate mutase/prephenate dehydratase, at 4,496,591 to 4,497,751
_RS21465
BWI76_RS21470: BWI76_RS21470 - gluconolaconase, at 4,497,748 to 4,498,620
_RS21470
BWI76_RS21475: BWI76_RS21475 - bifunctional chorismate mutase/prephenate dehydrogenase, at 4,498,689 to 4,499,810
_RS21475
BWI76_RS21480: BWI76_RS21480 - phospho-2-dehydro-3-deoxyheptonate aldolase, at 4,499,820 to 4,500,890
_RS21480
Position (kb)
4498
4499
4500 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 4497.709 kb on - strand at 4497.709 kb on - strand at 4497.888 kb on - strand, within BWI76_RS21470 at 4498.016 kb on + strand, within BWI76_RS21470 at 4498.440 kb on + strand, within BWI76_RS21470 at 4498.521 kb on + strand, within BWI76_RS21470 at 4498.563 kb on + strand at 4498.730 kb on - strand at 4498.908 kb on - strand, within BWI76_RS21475 at 4499.099 kb on - strand, within BWI76_RS21475 at 4499.118 kb on - strand, within BWI76_RS21475 at 4499.220 kb on + strand, within BWI76_RS21475 at 4499.591 kb on - strand, within BWI76_RS21475 at 4499.687 kb on + strand, within BWI76_RS21475 at 4499.758 kb on + strand at 4499.958 kb on + strand, within BWI76_RS21480 at 4499.968 kb on - strand, within BWI76_RS21480 at 4500.016 kb on + strand, within BWI76_RS21480 at 4500.016 kb on + strand, within BWI76_RS21480 at 4500.024 kb on - strand, within BWI76_RS21480 at 4500.221 kb on - strand, within BWI76_RS21480 at 4500.384 kb on - strand, within BWI76_RS21480 at 4500.440 kb on - strand, within BWI76_RS21480 at 4500.481 kb on + strand, within BWI76_RS21480 at 4500.584 kb on + strand, within BWI76_RS21480 at 4500.623 kb on + strand, within BWI76_RS21480 at 4500.631 kb on - strand, within BWI76_RS21480 at 4500.634 kb on + strand, within BWI76_RS21480 at 4500.641 kb on + strand, within BWI76_RS21480
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 4,497,709 - -1.0 4,497,709 - +0.1 4,497,888 - BWI76_RS21470 0.16 -0.3 4,498,016 + BWI76_RS21470 0.31 -0.1 4,498,440 + BWI76_RS21470 0.79 +0.1 4,498,521 + BWI76_RS21470 0.89 +1.8 4,498,563 + +1.1 4,498,730 - -2.0 4,498,908 - BWI76_RS21475 0.20 -4.2 4,499,099 - BWI76_RS21475 0.37 -3.2 4,499,118 - BWI76_RS21475 0.38 -5.0 4,499,220 + BWI76_RS21475 0.47 -3.3 4,499,591 - BWI76_RS21475 0.80 -4.2 4,499,687 + BWI76_RS21475 0.89 -3.3 4,499,758 + -1.6 4,499,958 + BWI76_RS21480 0.13 -4.2 4,499,968 - BWI76_RS21480 0.14 +0.6 4,500,016 + BWI76_RS21480 0.18 -3.8 4,500,016 + BWI76_RS21480 0.18 -2.4 4,500,024 - BWI76_RS21480 0.19 -0.4 4,500,221 - BWI76_RS21480 0.37 +0.5 4,500,384 - BWI76_RS21480 0.53 -0.6 4,500,440 - BWI76_RS21480 0.58 -0.2 4,500,481 + BWI76_RS21480 0.62 -0.2 4,500,584 + BWI76_RS21480 0.71 -0.1 4,500,623 + BWI76_RS21480 0.75 -1.0 4,500,631 - BWI76_RS21480 0.76 -0.2 4,500,634 + BWI76_RS21480 0.76 -0.4 4,500,641 + BWI76_RS21480 0.77 -2.6
Or see this region's nucleotide sequence