Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21440 and BWI76_RS21445 are separated by 127 nucleotides BWI76_RS21445 and BWI76_RS21450 overlap by 4 nucleotides BWI76_RS21450 and BWI76_RS21455 are separated by 132 nucleotides
BWI76_RS21440: BWI76_RS21440 - ATP-dependent chaperone ClpB, at 4,490,443 to 4,493,016
_RS21440
BWI76_RS21445: BWI76_RS21445 - hypothetical protein, at 4,493,144 to 4,493,875
_RS21445
BWI76_RS21450: BWI76_RS21450 - 23S rRNA pseudouridine(1911/1915/1917) synthase, at 4,493,872 to 4,494,852
_RS21450
BWI76_RS21455: BWI76_RS21455 - outer membrane protein assembly factor BamD, at 4,494,985 to 4,495,722
_RS21455
Position (kb)
4493
4494
4495 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4492.920 kb on - strand at 4492.973 kb on - strand at 4492.985 kb on - strand at 4493.082 kb on + strand at 4493.090 kb on + strand at 4493.090 kb on + strand at 4493.098 kb on - strand at 4493.142 kb on + strand at 4493.156 kb on + strand at 4493.232 kb on - strand, within BWI76_RS21445 at 4493.386 kb on + strand, within BWI76_RS21445 at 4493.413 kb on + strand, within BWI76_RS21445 at 4494.068 kb on + strand, within BWI76_RS21450 at 4494.244 kb on + strand, within BWI76_RS21450 at 4494.284 kb on - strand, within BWI76_RS21450 at 4494.452 kb on + strand, within BWI76_RS21450 at 4494.835 kb on - strand at 4494.840 kb on - strand at 4494.842 kb on - strand at 4494.888 kb on - strand at 4495.793 kb on - strand at 4495.796 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 4,492,920 - -0.1 4,492,973 - +0.5 4,492,985 - -0.1 4,493,082 + +0.6 4,493,090 + +0.3 4,493,090 + +0.4 4,493,098 - +2.8 4,493,142 + +0.0 4,493,156 + +0.2 4,493,232 - BWI76_RS21445 0.12 +0.7 4,493,386 + BWI76_RS21445 0.33 +0.3 4,493,413 + BWI76_RS21445 0.37 +0.6 4,494,068 + BWI76_RS21450 0.20 -1.3 4,494,244 + BWI76_RS21450 0.38 -0.9 4,494,284 - BWI76_RS21450 0.42 -0.3 4,494,452 + BWI76_RS21450 0.59 -1.0 4,494,835 - +0.4 4,494,840 - +0.3 4,494,842 - +0.5 4,494,888 - +0.7 4,495,793 - -0.7 4,495,796 + +0.1
Or see this region's nucleotide sequence