Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19170 and BWI76_RS19175 are separated by 299 nucleotides BWI76_RS19175 and BWI76_RS19180 are separated by 234 nucleotides
BWI76_RS19170: BWI76_RS19170 - hypothetical protein, at 3,989,528 to 3,990,145
_RS19170
BWI76_RS19175: BWI76_RS19175 - dicarboxylate/amino acid:cation symporter, at 3,990,445 to 3,991,719
_RS19175
BWI76_RS19180: BWI76_RS19180 - diguanylate cyclase, at 3,991,954 to 3,993,468
_RS19180
Position (kb)
3990
3991
3992 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3989.472 kb on - strand at 3989.479 kb on + strand at 3989.481 kb on - strand at 3989.484 kb on + strand at 3989.487 kb on - strand at 3989.491 kb on + strand at 3989.492 kb on - strand at 3989.504 kb on - strand at 3989.504 kb on - strand at 3989.504 kb on - strand at 3989.585 kb on - strand at 3989.594 kb on - strand, within BWI76_RS19170 at 3989.600 kb on - strand, within BWI76_RS19170 at 3989.687 kb on - strand, within BWI76_RS19170 at 3989.695 kb on - strand, within BWI76_RS19170 at 3989.708 kb on - strand, within BWI76_RS19170 at 3989.710 kb on + strand, within BWI76_RS19170 at 3989.710 kb on + strand, within BWI76_RS19170 at 3989.718 kb on - strand, within BWI76_RS19170 at 3989.718 kb on - strand, within BWI76_RS19170 at 3989.718 kb on - strand, within BWI76_RS19170 at 3989.721 kb on + strand, within BWI76_RS19170 at 3989.729 kb on - strand, within BWI76_RS19170 at 3989.729 kb on - strand, within BWI76_RS19170 at 3989.731 kb on - strand, within BWI76_RS19170 at 3989.756 kb on + strand, within BWI76_RS19170 at 3989.764 kb on - strand, within BWI76_RS19170 at 3989.764 kb on - strand, within BWI76_RS19170 at 3989.764 kb on - strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.766 kb on + strand, within BWI76_RS19170 at 3989.769 kb on + strand, within BWI76_RS19170 at 3989.769 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.774 kb on - strand, within BWI76_RS19170 at 3989.814 kb on - strand, within BWI76_RS19170 at 3989.815 kb on - strand, within BWI76_RS19170 at 3989.914 kb on - strand at 3989.914 kb on - strand, within BWI76_RS19170 at 3989.919 kb on - strand, within BWI76_RS19170 at 3989.937 kb on - strand, within BWI76_RS19170 at 3989.937 kb on - strand, within BWI76_RS19170 at 3989.945 kb on - strand, within BWI76_RS19170 at 3989.945 kb on - strand, within BWI76_RS19170 at 3989.945 kb on - strand, within BWI76_RS19170 at 3989.959 kb on + strand, within BWI76_RS19170 at 3990.036 kb on - strand, within BWI76_RS19170 at 3990.036 kb on - strand, within BWI76_RS19170 at 3990.134 kb on - strand at 3990.141 kb on + strand at 3990.148 kb on - strand at 3990.149 kb on - strand at 3990.240 kb on + strand at 3990.254 kb on + strand at 3990.257 kb on - strand at 3990.262 kb on + strand at 3990.268 kb on - strand at 3990.270 kb on - strand at 3990.274 kb on + strand at 3990.327 kb on + strand at 3990.355 kb on + strand at 3990.378 kb on + strand at 3990.382 kb on - strand at 3990.399 kb on + strand at 3990.399 kb on + strand at 3990.407 kb on - strand at 3990.407 kb on - strand at 3990.407 kb on - strand at 3990.407 kb on - strand at 3990.423 kb on + strand at 3990.423 kb on + strand at 3990.430 kb on - strand at 3990.430 kb on - strand at 3990.476 kb on + strand at 3990.536 kb on + strand at 3990.590 kb on - strand at 3990.600 kb on + strand, within BWI76_RS19175 at 3990.638 kb on + strand, within BWI76_RS19175 at 3990.792 kb on - strand, within BWI76_RS19175 at 3990.792 kb on - strand, within BWI76_RS19175 at 3990.797 kb on - strand, within BWI76_RS19175 at 3990.804 kb on + strand, within BWI76_RS19175 at 3990.804 kb on + strand, within BWI76_RS19175 at 3990.804 kb on + strand, within BWI76_RS19175 at 3990.812 kb on - strand, within BWI76_RS19175 at 3990.812 kb on - strand, within BWI76_RS19175 at 3990.874 kb on + strand, within BWI76_RS19175 at 3990.881 kb on - strand, within BWI76_RS19175 at 3990.978 kb on + strand, within BWI76_RS19175 at 3990.986 kb on - strand, within BWI76_RS19175 at 3991.052 kb on + strand, within BWI76_RS19175 at 3991.254 kb on - strand, within BWI76_RS19175 at 3991.401 kb on + strand, within BWI76_RS19175 at 3991.409 kb on - strand, within BWI76_RS19175 at 3991.420 kb on - strand, within BWI76_RS19175 at 3991.542 kb on - strand, within BWI76_RS19175 at 3991.542 kb on - strand, within BWI76_RS19175 at 3991.642 kb on - strand at 3991.642 kb on - strand at 3991.664 kb on + strand at 3991.668 kb on - strand at 3991.674 kb on - strand at 3991.685 kb on + strand at 3992.030 kb on + strand at 3992.045 kb on + strand at 3992.069 kb on + strand at 3992.099 kb on + strand at 3992.099 kb on + strand at 3992.107 kb on - strand, within BWI76_RS19180 at 3992.107 kb on - strand, within BWI76_RS19180 at 3992.164 kb on - strand, within BWI76_RS19180 at 3992.263 kb on - strand, within BWI76_RS19180 at 3992.263 kb on - strand, within BWI76_RS19180 at 3992.348 kb on + strand, within BWI76_RS19180 at 3992.414 kb on + strand, within BWI76_RS19180 at 3992.459 kb on + strand, within BWI76_RS19180 at 3992.599 kb on + strand, within BWI76_RS19180 at 3992.624 kb on - strand, within BWI76_RS19180
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,989,472 - +1.0 3,989,479 + +0.7 3,989,481 - +0.7 3,989,484 + -0.5 3,989,487 - +0.1 3,989,491 + -0.3 3,989,492 - -0.9 3,989,504 - +0.9 3,989,504 - +1.1 3,989,504 - -0.1 3,989,585 - +0.7 3,989,594 - BWI76_RS19170 0.11 +0.9 3,989,600 - BWI76_RS19170 0.12 -1.3 3,989,687 - BWI76_RS19170 0.26 -1.2 3,989,695 - BWI76_RS19170 0.27 +2.5 3,989,708 - BWI76_RS19170 0.29 -0.2 3,989,710 + BWI76_RS19170 0.29 -0.2 3,989,710 + BWI76_RS19170 0.29 -0.3 3,989,718 - BWI76_RS19170 0.31 -1.8 3,989,718 - BWI76_RS19170 0.31 -0.1 3,989,718 - BWI76_RS19170 0.31 +0.0 3,989,721 + BWI76_RS19170 0.31 -0.1 3,989,729 - BWI76_RS19170 0.33 +0.5 3,989,729 - BWI76_RS19170 0.33 -1.3 3,989,731 - BWI76_RS19170 0.33 -1.2 3,989,756 + BWI76_RS19170 0.37 -2.4 3,989,764 - BWI76_RS19170 0.38 +0.5 3,989,764 - BWI76_RS19170 0.38 -0.2 3,989,764 - BWI76_RS19170 0.38 -0.2 3,989,766 + BWI76_RS19170 0.39 -0.8 3,989,766 + BWI76_RS19170 0.39 +0.4 3,989,766 + +1.6 3,989,766 + BWI76_RS19170 0.39 +0.2 3,989,766 + BWI76_RS19170 0.39 +1.3 3,989,766 + BWI76_RS19170 0.39 -1.4 3,989,766 + BWI76_RS19170 0.39 -0.9 3,989,766 + BWI76_RS19170 0.39 +0.2 3,989,766 + BWI76_RS19170 0.39 -0.9 3,989,766 + BWI76_RS19170 0.39 -3.2 3,989,766 + BWI76_RS19170 0.39 -1.8 3,989,766 + BWI76_RS19170 0.39 +0.2 3,989,766 + BWI76_RS19170 0.39 -0.3 3,989,766 + BWI76_RS19170 0.39 -1.0 3,989,769 + BWI76_RS19170 0.39 +0.3 3,989,769 - BWI76_RS19170 0.39 +0.3 3,989,774 - BWI76_RS19170 0.40 -0.9 3,989,774 - BWI76_RS19170 0.40 +1.0 3,989,774 - BWI76_RS19170 0.40 -0.2 3,989,774 - BWI76_RS19170 0.40 +0.3 3,989,774 - BWI76_RS19170 0.40 +0.5 3,989,774 - BWI76_RS19170 0.40 +0.1 3,989,774 - BWI76_RS19170 0.40 +0.1 3,989,774 - BWI76_RS19170 0.40 -0.0 3,989,814 - BWI76_RS19170 0.46 -0.7 3,989,815 - BWI76_RS19170 0.46 -1.2 3,989,914 - -0.0 3,989,914 - BWI76_RS19170 0.62 -0.6 3,989,919 - BWI76_RS19170 0.63 +0.3 3,989,937 - BWI76_RS19170 0.66 +0.3 3,989,937 - BWI76_RS19170 0.66 -0.9 3,989,945 - BWI76_RS19170 0.67 +0.9 3,989,945 - BWI76_RS19170 0.67 -0.7 3,989,945 - BWI76_RS19170 0.67 +0.1 3,989,959 + BWI76_RS19170 0.70 +0.6 3,990,036 - BWI76_RS19170 0.82 -2.3 3,990,036 - BWI76_RS19170 0.82 +0.9 3,990,134 - +0.5 3,990,141 + -0.9 3,990,148 - -0.0 3,990,149 - +0.4 3,990,240 + +0.5 3,990,254 + +0.7 3,990,257 - -0.9 3,990,262 + -0.3 3,990,268 - -1.8 3,990,270 - +0.3 3,990,274 + -1.0 3,990,327 + -0.1 3,990,355 + -2.0 3,990,378 + +0.4 3,990,382 - -0.7 3,990,399 + -0.9 3,990,399 + -0.2 3,990,407 - +1.4 3,990,407 - +0.5 3,990,407 - -0.0 3,990,407 - -0.1 3,990,423 + -0.3 3,990,423 + -0.4 3,990,430 - -0.7 3,990,430 - -1.2 3,990,476 + -3.0 3,990,536 + +0.9 3,990,590 - -0.4 3,990,600 + BWI76_RS19175 0.12 -1.3 3,990,638 + BWI76_RS19175 0.15 -0.8 3,990,792 - BWI76_RS19175 0.27 -1.3 3,990,792 - BWI76_RS19175 0.27 -1.0 3,990,797 - BWI76_RS19175 0.28 -1.4 3,990,804 + BWI76_RS19175 0.28 -0.0 3,990,804 + BWI76_RS19175 0.28 -1.0 3,990,804 + BWI76_RS19175 0.28 -0.6 3,990,812 - BWI76_RS19175 0.29 -0.6 3,990,812 - BWI76_RS19175 0.29 -1.4 3,990,874 + BWI76_RS19175 0.34 -0.6 3,990,881 - BWI76_RS19175 0.34 -0.7 3,990,978 + BWI76_RS19175 0.42 -2.0 3,990,986 - BWI76_RS19175 0.42 -0.5 3,991,052 + BWI76_RS19175 0.48 -2.1 3,991,254 - BWI76_RS19175 0.63 -1.5 3,991,401 + BWI76_RS19175 0.75 -0.4 3,991,409 - BWI76_RS19175 0.76 -1.6 3,991,420 - BWI76_RS19175 0.76 -1.6 3,991,542 - BWI76_RS19175 0.86 -0.5 3,991,542 - BWI76_RS19175 0.86 -2.6 3,991,642 - -1.2 3,991,642 - -0.9 3,991,664 + -3.1 3,991,668 - +0.4 3,991,674 - +1.6 3,991,685 + -0.4 3,992,030 + +0.1 3,992,045 + +0.3 3,992,069 + +1.3 3,992,099 + -0.3 3,992,099 + +0.2 3,992,107 - BWI76_RS19180 0.10 +0.5 3,992,107 - BWI76_RS19180 0.10 +3.6 3,992,164 - BWI76_RS19180 0.14 +0.6 3,992,263 - BWI76_RS19180 0.20 -1.1 3,992,263 - BWI76_RS19180 0.20 -0.3 3,992,348 + BWI76_RS19180 0.26 +0.6 3,992,414 + BWI76_RS19180 0.30 -0.3 3,992,459 + BWI76_RS19180 0.33 +0.4 3,992,599 + BWI76_RS19180 0.43 +0.1 3,992,624 - BWI76_RS19180 0.44 -0.1
Or see this region's nucleotide sequence