Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS19035

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS19030 and BWI76_RS19035 are separated by 366 nucleotidesBWI76_RS19035 and BWI76_RS19040 are separated by 23 nucleotides BWI76_RS19030: BWI76_RS19030 - hypothetical protein, at 3,951,731 to 3,952,939 _RS19030 BWI76_RS19035: BWI76_RS19035 - dTDP-rhamnosyl transferase, at 3,953,306 to 3,954,193 _RS19035 BWI76_RS19040: BWI76_RS19040 - hypothetical protein, at 3,954,217 to 3,955,347 _RS19040 Position (kb) 3953 3954 3955Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3952.325 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strandat 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.331 kb on - strand, within BWI76_RS19030at 3952.337 kb on - strand, within BWI76_RS19030at 3952.405 kb on - strand, within BWI76_RS19030at 3952.415 kb on - strand, within BWI76_RS19030at 3952.434 kb on - strand, within BWI76_RS19030at 3952.526 kb on - strand, within BWI76_RS19030at 3952.638 kb on - strand, within BWI76_RS19030at 3952.716 kb on - strand, within BWI76_RS19030at 3952.729 kb on - strand, within BWI76_RS19030at 3952.747 kb on - strand, within BWI76_RS19030at 3952.748 kb on - strand, within BWI76_RS19030at 3952.793 kb on - strand, within BWI76_RS19030at 3952.863 kb on - strandat 3952.868 kb on - strandat 3952.868 kb on - strandat 3952.868 kb on - strandat 3952.868 kb on - strandat 3952.868 kb on - strandat 3952.868 kb on - strandat 3952.868 kb on - strandat 3952.918 kb on - strandat 3952.927 kb on - strandat 3952.927 kb on - strandat 3952.927 kb on - strandat 3952.937 kb on - strandat 3952.937 kb on - strandat 3953.018 kb on - strandat 3953.033 kb on - strandat 3953.066 kb on - strandat 3953.199 kb on - strandat 3953.209 kb on - strandat 3953.209 kb on - strandat 3953.512 kb on - strand, within BWI76_RS19035at 3953.512 kb on - strand, within BWI76_RS19035at 3953.524 kb on - strand, within BWI76_RS19035at 3953.539 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.578 kb on - strand, within BWI76_RS19035at 3953.580 kb on - strand, within BWI76_RS19035at 3953.635 kb on - strand, within BWI76_RS19035at 3953.638 kb on - strand, within BWI76_RS19035at 3953.638 kb on - strand, within BWI76_RS19035at 3953.638 kb on - strand, within BWI76_RS19035at 3953.645 kb on - strand, within BWI76_RS19035at 3953.683 kb on - strand, within BWI76_RS19035at 3953.692 kb on - strand, within BWI76_RS19035at 3953.709 kb on - strand, within BWI76_RS19035at 3953.823 kb on - strand, within BWI76_RS19035at 3953.851 kb on - strand, within BWI76_RS19035at 3953.859 kb on - strand, within BWI76_RS19035at 3954.059 kb on - strand, within BWI76_RS19035at 3954.125 kb on - strandat 3954.253 kb on - strandat 3954.358 kb on - strand, within BWI76_RS19040at 3954.461 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.496 kb on - strand, within BWI76_RS19040at 3954.506 kb on - strand, within BWI76_RS19040at 3954.506 kb on - strand, within BWI76_RS19040at 3954.714 kb on - strand, within BWI76_RS19040at 3954.782 kb on - strand, within BWI76_RS19040at 3955.187 kb on - strand, within BWI76_RS19040

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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3,952,325 - BWI76_RS19030 0.49 -0.5
3,952,331 - BWI76_RS19030 0.50 -0.1
3,952,331 - BWI76_RS19030 0.50 +0.7
3,952,331 - -0.6
3,952,331 - BWI76_RS19030 0.50 +0.8
3,952,331 - BWI76_RS19030 0.50 -0.1
3,952,331 - BWI76_RS19030 0.50 +0.3
3,952,331 - BWI76_RS19030 0.50 -0.9
3,952,331 - BWI76_RS19030 0.50 -0.1
3,952,337 - BWI76_RS19030 0.50 -0.7
3,952,405 - BWI76_RS19030 0.56 +0.1
3,952,415 - BWI76_RS19030 0.57 -0.3
3,952,434 - BWI76_RS19030 0.58 -0.5
3,952,526 - BWI76_RS19030 0.66 -0.6
3,952,638 - BWI76_RS19030 0.75 +0.3
3,952,716 - BWI76_RS19030 0.81 +0.4
3,952,729 - BWI76_RS19030 0.83 +0.6
3,952,747 - BWI76_RS19030 0.84 -0.2
3,952,748 - BWI76_RS19030 0.84 -0.5
3,952,793 - BWI76_RS19030 0.88 +1.2
3,952,863 - -1.7
3,952,868 - -0.4
3,952,868 - +0.2
3,952,868 - -0.3
3,952,868 - -0.6
3,952,868 - +0.5
3,952,868 - +0.9
3,952,868 - -2.3
3,952,918 - -0.6
3,952,927 - +0.7
3,952,927 - +0.4
3,952,927 - -2.5
3,952,937 - -0.2
3,952,937 - +0.7
3,953,018 - -0.0
3,953,033 - -0.7
3,953,066 - -0.8
3,953,199 - +1.1
3,953,209 - +0.8
3,953,209 - -2.5
3,953,512 - BWI76_RS19035 0.23 -1.3
3,953,512 - BWI76_RS19035 0.23 -0.2
3,953,524 - BWI76_RS19035 0.25 -1.4
3,953,539 - BWI76_RS19035 0.26 -1.3
3,953,578 - BWI76_RS19035 0.31 -1.0
3,953,578 - BWI76_RS19035 0.31 +2.5
3,953,578 - BWI76_RS19035 0.31 -3.7
3,953,578 - BWI76_RS19035 0.31 -1.4
3,953,578 - BWI76_RS19035 0.31 -1.4
3,953,578 - BWI76_RS19035 0.31 -1.7
3,953,580 - BWI76_RS19035 0.31 +0.2
3,953,635 - BWI76_RS19035 0.37 -0.9
3,953,638 - BWI76_RS19035 0.37 -2.7
3,953,638 - BWI76_RS19035 0.37 -0.8
3,953,638 - BWI76_RS19035 0.37 +0.4
3,953,645 - BWI76_RS19035 0.38 -0.9
3,953,683 - BWI76_RS19035 0.42 -1.5
3,953,692 - BWI76_RS19035 0.43 -0.3
3,953,709 - BWI76_RS19035 0.45 -1.3
3,953,823 - BWI76_RS19035 0.58 +1.3
3,953,851 - BWI76_RS19035 0.61 -0.9
3,953,859 - BWI76_RS19035 0.62 -1.1
3,954,059 - BWI76_RS19035 0.85 -2.3
3,954,125 - +0.3
3,954,253 - -0.7
3,954,358 - BWI76_RS19040 0.12 +0.1
3,954,461 - BWI76_RS19040 0.22 -0.7
3,954,496 - BWI76_RS19040 0.25 -0.3
3,954,496 - BWI76_RS19040 0.25 -1.5
3,954,496 - BWI76_RS19040 0.25 -0.6
3,954,506 - BWI76_RS19040 0.26 -1.7
3,954,506 - BWI76_RS19040 0.26 -0.4
3,954,714 - BWI76_RS19040 0.44 -0.1
3,954,782 - BWI76_RS19040 0.50 -0.3
3,955,187 - BWI76_RS19040 0.86 +0.3

Or see this region's nucleotide sequence