Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18625 and BWI76_RS18630 are separated by 106 nucleotides BWI76_RS18630 and BWI76_RS18635 are separated by 330 nucleotides
BWI76_RS18625: BWI76_RS18625 - CysB family transcriptional regulator, at 3,861,827 to 3,862,777
_RS18625
BWI76_RS18630: BWI76_RS18630 - nitrogen assimilation transcriptional regulator, at 3,862,884 to 3,863,801
_RS18630
BWI76_RS18635: BWI76_RS18635 - tRNA-Asn, at 3,864,132 to 3,864,207
_RS18635
Position (kb)
3862
3863
3864 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3861.980 kb on - strand, within BWI76_RS18625 at 3862.062 kb on - strand, within BWI76_RS18625 at 3862.090 kb on - strand, within BWI76_RS18625 at 3862.142 kb on + strand, within BWI76_RS18625 at 3862.148 kb on + strand, within BWI76_RS18625 at 3862.150 kb on - strand, within BWI76_RS18625 at 3862.150 kb on - strand, within BWI76_RS18625 at 3862.399 kb on - strand, within BWI76_RS18625 at 3862.400 kb on - strand, within BWI76_RS18625 at 3862.434 kb on - strand, within BWI76_RS18625 at 3862.457 kb on + strand, within BWI76_RS18625 at 3862.472 kb on + strand, within BWI76_RS18625 at 3862.485 kb on - strand, within BWI76_RS18625 at 3862.584 kb on + strand, within BWI76_RS18625 at 3862.685 kb on + strand at 3862.695 kb on + strand at 3862.703 kb on - strand at 3862.724 kb on - strand at 3862.776 kb on + strand at 3862.793 kb on + strand at 3862.962 kb on + strand at 3862.962 kb on + strand at 3862.970 kb on - strand at 3862.994 kb on + strand, within BWI76_RS18630 at 3863.006 kb on + strand, within BWI76_RS18630 at 3863.016 kb on + strand, within BWI76_RS18630 at 3863.024 kb on - strand, within BWI76_RS18630 at 3863.039 kb on - strand, within BWI76_RS18630 at 3863.054 kb on - strand, within BWI76_RS18630 at 3863.368 kb on + strand, within BWI76_RS18630 at 3863.376 kb on - strand, within BWI76_RS18630 at 3863.423 kb on + strand, within BWI76_RS18630 at 3863.545 kb on - strand, within BWI76_RS18630 at 3863.591 kb on - strand, within BWI76_RS18630 at 3863.740 kb on + strand at 3863.816 kb on + strand at 3863.817 kb on - strand at 3863.820 kb on + strand at 3864.285 kb on + strand at 3864.312 kb on + strand at 3864.318 kb on + strand at 3864.388 kb on - strand at 3864.391 kb on + strand at 3864.412 kb on - strand at 3864.508 kb on + strand at 3864.609 kb on + strand at 3864.617 kb on - strand at 3864.617 kb on - strand at 3864.617 kb on - strand at 3864.624 kb on + strand at 3864.624 kb on + strand at 3864.624 kb on + strand at 3864.624 kb on + strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.632 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.635 kb on - strand at 3864.637 kb on + strand at 3864.645 kb on - strand at 3864.645 kb on - strand at 3864.645 kb on - strand at 3864.645 kb on - strand at 3864.645 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,861,980 - BWI76_RS18625 0.16 +0.2 3,862,062 - BWI76_RS18625 0.25 +0.8 3,862,090 - BWI76_RS18625 0.28 -0.1 3,862,142 + BWI76_RS18625 0.33 -0.1 3,862,148 + BWI76_RS18625 0.34 +0.3 3,862,150 - BWI76_RS18625 0.34 +0.3 3,862,150 - BWI76_RS18625 0.34 +0.9 3,862,399 - BWI76_RS18625 0.60 +0.2 3,862,400 - BWI76_RS18625 0.60 +0.4 3,862,434 - BWI76_RS18625 0.64 -0.4 3,862,457 + BWI76_RS18625 0.66 +2.6 3,862,472 + BWI76_RS18625 0.68 -0.2 3,862,485 - BWI76_RS18625 0.69 +0.2 3,862,584 + BWI76_RS18625 0.80 +0.1 3,862,685 + +0.2 3,862,695 + -0.8 3,862,703 - -0.1 3,862,724 - +0.1 3,862,776 + -1.0 3,862,793 + -2.4 3,862,962 + -1.2 3,862,962 + -1.9 3,862,970 - -2.7 3,862,994 + BWI76_RS18630 0.12 -1.9 3,863,006 + BWI76_RS18630 0.13 -1.9 3,863,016 + BWI76_RS18630 0.14 -0.2 3,863,024 - BWI76_RS18630 0.15 -2.7 3,863,039 - BWI76_RS18630 0.17 -1.6 3,863,054 - BWI76_RS18630 0.19 -3.8 3,863,368 + BWI76_RS18630 0.53 -2.0 3,863,376 - BWI76_RS18630 0.54 -1.6 3,863,423 + BWI76_RS18630 0.59 -1.1 3,863,545 - BWI76_RS18630 0.72 -1.8 3,863,591 - BWI76_RS18630 0.77 -2.1 3,863,740 + -3.8 3,863,816 + -2.9 3,863,817 - -2.4 3,863,820 + -3.8 3,864,285 + +0.4 3,864,312 + +1.4 3,864,318 + +0.9 3,864,388 - -0.9 3,864,391 + -0.9 3,864,412 - +0.6 3,864,508 + +0.8 3,864,609 + +1.6 3,864,617 - -0.8 3,864,617 - -1.6 3,864,617 - +0.1 3,864,624 + +0.4 3,864,624 + -1.8 3,864,624 + +2.1 3,864,624 + -1.4 3,864,632 - -0.3 3,864,632 - -2.0 3,864,632 - -0.3 3,864,632 - -0.2 3,864,632 - -2.5 3,864,632 - -1.1 3,864,632 - -2.6 3,864,632 - -1.2 3,864,632 - +1.4 3,864,632 - -2.0 3,864,632 - -1.2 3,864,632 - -1.8 3,864,632 - -0.2 3,864,632 - -1.4 3,864,635 - -0.4 3,864,635 - +1.8 3,864,635 - +0.8 3,864,635 - +0.4 3,864,635 - +1.9 3,864,635 - -0.4 3,864,635 - -1.8 3,864,635 - +2.4 3,864,635 - -1.8 3,864,637 + +0.6 3,864,645 - -0.1 3,864,645 - -0.8 3,864,645 - +0.4 3,864,645 - -0.8 3,864,645 - +0.7
Or see this region's nucleotide sequence