Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17365 and BWI76_RS17370 are separated by 9 nucleotides BWI76_RS17370 and BWI76_RS17375 are separated by 10 nucleotides BWI76_RS17375 and BWI76_RS17380 are separated by 1 nucleotides
BWI76_RS17365: BWI76_RS17365 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) <small>(from data)</small>, at 3,600,666 to 3,604,736
_RS17365
BWI76_RS17370: BWI76_RS17370 - nitrate transporter NasD, at 3,604,746 to 3,605,534
_RS17370
BWI76_RS17375: BWI76_RS17375 - nitrate ABC transporter, permease protein, at 3,605,545 to 3,606,429
_RS17375
BWI76_RS17380: BWI76_RS17380 - nitrate transporter component, at 3,606,431 to 3,607,687
_RS17380
Position (kb) 3604
3605
3606 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 3603.750 kb on - strand, within BWI76_RS17365 at 3604.045 kb on - strand, within BWI76_RS17365 at 3604.315 kb on - strand, within BWI76_RS17365 at 3604.466 kb on - strand at 3604.807 kb on - strand at 3605.341 kb on + strand, within BWI76_RS17370 at 3605.452 kb on - strand, within BWI76_RS17370 at 3605.877 kb on + strand, within BWI76_RS17375 at 3606.323 kb on - strand, within BWI76_RS17375
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,603,750 - BWI76_RS17365 0.76 +0.0 3,604,045 - BWI76_RS17365 0.83 +0.3 3,604,315 - BWI76_RS17365 0.90 +0.5 3,604,466 - +0.6 3,604,807 - +0.9 3,605,341 + BWI76_RS17370 0.75 +0.9 3,605,452 - BWI76_RS17370 0.89 +4.1 3,605,877 + BWI76_RS17375 0.38 +0.8 3,606,323 - BWI76_RS17375 0.88 +1.2
Or see this region's nucleotide sequence