Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS17340 and BWI76_RS17345 are separated by 311 nucleotides BWI76_RS17345 and BWI76_RS17350 are separated by 10 nucleotides BWI76_RS17350 and BWI76_RS17355 overlap by 4 nucleotides
BWI76_RS17340: BWI76_RS17340 - NarK family nitrate/nitrite MFS transporter, at 3,592,448 to 3,593,836
_RS17340
BWI76_RS17345: BWI76_RS17345 - nitrate/nitrite two-component system sensor histidine kinase NarX, at 3,594,148 to 3,595,926
_RS17345
BWI76_RS17350: BWI76_RS17350 - DNA-binding response regulator, at 3,595,937 to 3,596,587
_RS17350
BWI76_RS17355: BWI76_RS17355 - YchO family inverse autotransporter domain-containing protein, at 3,596,584 to 3,597,963
_RS17355
Position (kb)
3594
3595
3596 Strain fitness (log2 ratio)
-2
-1
0
1 at 3593.420 kb on - strand, within BWI76_RS17340 at 3593.531 kb on - strand, within BWI76_RS17340 at 3593.651 kb on - strand at 3593.832 kb on + strand at 3593.842 kb on + strand at 3594.265 kb on + strand at 3594.273 kb on - strand at 3594.325 kb on - strand at 3594.618 kb on + strand, within BWI76_RS17345 at 3595.056 kb on + strand, within BWI76_RS17345 at 3595.157 kb on + strand, within BWI76_RS17345 at 3595.701 kb on + strand, within BWI76_RS17345 at 3596.379 kb on + strand, within BWI76_RS17350 at 3596.476 kb on + strand, within BWI76_RS17350 at 3596.924 kb on - strand, within BWI76_RS17355
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,593,420 - BWI76_RS17340 0.70 -0.1 3,593,531 - BWI76_RS17340 0.78 -1.3 3,593,651 - +1.1 3,593,832 + -0.5 3,593,842 + -0.7 3,594,265 + -0.0 3,594,273 - +0.1 3,594,325 - -0.6 3,594,618 + BWI76_RS17345 0.26 -0.7 3,595,056 + BWI76_RS17345 0.51 -0.5 3,595,157 + BWI76_RS17345 0.57 -2.2 3,595,701 + BWI76_RS17345 0.87 -2.0 3,596,379 + BWI76_RS17350 0.68 +1.1 3,596,476 + BWI76_RS17350 0.83 +0.4 3,596,924 - BWI76_RS17355 0.25 +0.3
Or see this region's nucleotide sequence