Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15800 and BWI76_RS15805 are separated by 104 nucleotides BWI76_RS15805 and BWI76_RS15810 are separated by 182 nucleotides BWI76_RS15810 and BWI76_RS15815 overlap by 4 nucleotides BWI76_RS15815 and BWI76_RS15820 are separated by 322 nucleotides
BWI76_RS15800: BWI76_RS15800 - transcriptional regulator, at 3,287,137 to 3,287,370
_RS15800
BWI76_RS15805: BWI76_RS15805 - hypothetical protein, at 3,287,475 to 3,288,164
_RS15805
BWI76_RS15810: BWI76_RS15810 - hypothetical protein, at 3,288,347 to 3,288,781
_RS15810
BWI76_RS15815: BWI76_RS15815 - hypothetical protein, at 3,288,778 to 3,289,425
_RS15815
BWI76_RS15820: BWI76_RS15820 - hypothetical protein, at 3,289,748 to 3,289,951
_RS15820
Position (kb)
3288
3289 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3288.160 kb on + strand at 3288.309 kb on + strand at 3288.311 kb on + strand at 3288.408 kb on - strand, within BWI76_RS15810 at 3288.618 kb on + strand, within BWI76_RS15810 at 3288.639 kb on + strand, within BWI76_RS15810 at 3288.675 kb on + strand, within BWI76_RS15810 at 3288.683 kb on - strand, within BWI76_RS15810 at 3288.686 kb on + strand, within BWI76_RS15810 at 3288.686 kb on + strand, within BWI76_RS15810 at 3288.688 kb on + strand, within BWI76_RS15810 at 3288.688 kb on + strand, within BWI76_RS15810 at 3288.688 kb on + strand, within BWI76_RS15810 at 3288.735 kb on - strand, within BWI76_RS15810 at 3288.832 kb on + strand at 3288.832 kb on + strand at 3288.832 kb on + strand at 3288.833 kb on + strand at 3288.850 kb on - strand, within BWI76_RS15815 at 3288.900 kb on + strand, within BWI76_RS15815 at 3288.901 kb on + strand at 3288.912 kb on + strand, within BWI76_RS15815 at 3288.959 kb on - strand, within BWI76_RS15815 at 3288.966 kb on + strand, within BWI76_RS15815 at 3289.030 kb on + strand, within BWI76_RS15815 at 3289.030 kb on + strand, within BWI76_RS15815 at 3289.030 kb on + strand, within BWI76_RS15815 at 3289.036 kb on + strand, within BWI76_RS15815 at 3289.036 kb on + strand at 3289.036 kb on + strand, within BWI76_RS15815 at 3289.036 kb on + strand, within BWI76_RS15815 at 3289.038 kb on - strand, within BWI76_RS15815 at 3289.038 kb on - strand, within BWI76_RS15815 at 3289.044 kb on - strand, within BWI76_RS15815 at 3289.044 kb on - strand, within BWI76_RS15815 at 3289.044 kb on - strand, within BWI76_RS15815 at 3289.197 kb on - strand, within BWI76_RS15815 at 3289.202 kb on - strand, within BWI76_RS15815 at 3289.202 kb on - strand, within BWI76_RS15815 at 3289.297 kb on + strand, within BWI76_RS15815 at 3289.305 kb on + strand, within BWI76_RS15815 at 3289.311 kb on + strand, within BWI76_RS15815 at 3289.336 kb on + strand, within BWI76_RS15815 at 3289.392 kb on - strand at 3289.664 kb on + strand at 3289.672 kb on - strand at 3289.753 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,288,160 + -0.1 3,288,309 + +0.2 3,288,311 + -3.8 3,288,408 - BWI76_RS15810 0.14 -2.4 3,288,618 + BWI76_RS15810 0.62 +0.6 3,288,639 + BWI76_RS15810 0.67 -0.4 3,288,675 + BWI76_RS15810 0.75 -1.0 3,288,683 - BWI76_RS15810 0.77 +0.9 3,288,686 + BWI76_RS15810 0.78 -3.4 3,288,686 + BWI76_RS15810 0.78 -0.9 3,288,688 + BWI76_RS15810 0.78 -0.7 3,288,688 + BWI76_RS15810 0.78 -2.4 3,288,688 + BWI76_RS15810 0.78 -1.6 3,288,735 - BWI76_RS15810 0.89 -0.1 3,288,832 + -1.0 3,288,832 + -0.8 3,288,832 + -1.4 3,288,833 + +0.7 3,288,850 - BWI76_RS15815 0.11 -1.0 3,288,900 + BWI76_RS15815 0.19 +0.3 3,288,901 + -0.1 3,288,912 + BWI76_RS15815 0.21 -0.3 3,288,959 - BWI76_RS15815 0.28 +4.2 3,288,966 + BWI76_RS15815 0.29 -0.4 3,289,030 + BWI76_RS15815 0.39 -1.3 3,289,030 + BWI76_RS15815 0.39 -0.4 3,289,030 + BWI76_RS15815 0.39 +1.9 3,289,036 + BWI76_RS15815 0.40 -1.2 3,289,036 + -0.4 3,289,036 + BWI76_RS15815 0.40 +0.3 3,289,036 + BWI76_RS15815 0.40 -0.6 3,289,038 - BWI76_RS15815 0.40 -2.9 3,289,038 - BWI76_RS15815 0.40 -0.7 3,289,044 - BWI76_RS15815 0.41 -0.3 3,289,044 - BWI76_RS15815 0.41 +0.3 3,289,044 - BWI76_RS15815 0.41 -1.1 3,289,197 - BWI76_RS15815 0.65 +0.4 3,289,202 - BWI76_RS15815 0.65 -0.6 3,289,202 - BWI76_RS15815 0.65 +0.7 3,289,297 + BWI76_RS15815 0.80 -0.4 3,289,305 + BWI76_RS15815 0.81 -0.2 3,289,311 + BWI76_RS15815 0.82 -1.9 3,289,336 + BWI76_RS15815 0.86 +0.3 3,289,392 - -0.7 3,289,664 + +1.3 3,289,672 - -0.5 3,289,753 - -0.6
Or see this region's nucleotide sequence