Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15055 and BWI76_RS15060 are separated by 429 nucleotides BWI76_RS15060 and BWI76_RS15065 are separated by 114 nucleotides BWI76_RS15065 and BWI76_RS15070 are separated by 36 nucleotides
BWI76_RS15055: BWI76_RS15055 - lysine transporter LysE, at 3,151,275 to 3,151,895
_RS15055
BWI76_RS15060: BWI76_RS15060 - MarR family transcriptional regulator, at 3,152,325 to 3,152,822
_RS15060
BWI76_RS15065: BWI76_RS15065 - hypothetical protein, at 3,152,937 to 3,153,329
_RS15065
BWI76_RS15070: BWI76_RS15070 - non-ribosomal peptide synthetase, at 3,153,366 to 3,157,736
_RS15070
Position (kb)
3152
3153 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3151.390 kb on + strand, within BWI76_RS15055 at 3151.462 kb on + strand, within BWI76_RS15055 at 3151.577 kb on - strand, within BWI76_RS15055 at 3151.596 kb on + strand, within BWI76_RS15055 at 3151.604 kb on - strand, within BWI76_RS15055 at 3151.627 kb on - strand, within BWI76_RS15055 at 3151.662 kb on - strand, within BWI76_RS15055 at 3151.671 kb on - strand, within BWI76_RS15055 at 3151.673 kb on + strand, within BWI76_RS15055 at 3151.680 kb on + strand, within BWI76_RS15055 at 3151.680 kb on + strand, within BWI76_RS15055 at 3151.681 kb on - strand, within BWI76_RS15055 at 3151.682 kb on - strand, within BWI76_RS15055 at 3151.682 kb on - strand, within BWI76_RS15055 at 3151.688 kb on - strand, within BWI76_RS15055 at 3151.688 kb on - strand, within BWI76_RS15055 at 3151.701 kb on - strand, within BWI76_RS15055 at 3151.708 kb on - strand, within BWI76_RS15055 at 3151.708 kb on - strand, within BWI76_RS15055 at 3151.712 kb on + strand, within BWI76_RS15055 at 3151.727 kb on - strand, within BWI76_RS15055 at 3151.746 kb on + strand at 3151.761 kb on - strand, within BWI76_RS15055 at 3151.822 kb on + strand, within BWI76_RS15055 at 3151.843 kb on - strand at 3151.848 kb on - strand at 3151.871 kb on - strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.951 kb on + strand at 3151.959 kb on - strand at 3151.959 kb on - strand at 3151.959 kb on - strand at 3151.990 kb on - strand at 3152.129 kb on + strand at 3152.438 kb on - strand, within BWI76_RS15060 at 3152.442 kb on - strand, within BWI76_RS15060 at 3152.457 kb on - strand, within BWI76_RS15060 at 3152.495 kb on - strand, within BWI76_RS15060 at 3152.695 kb on - strand, within BWI76_RS15060 at 3152.729 kb on - strand, within BWI76_RS15060 at 3153.179 kb on - strand, within BWI76_RS15065 at 3153.293 kb on - strand at 3153.293 kb on - strand at 3153.414 kb on - strand at 3153.428 kb on + strand at 3153.428 kb on + strand at 3153.436 kb on - strand at 3153.436 kb on - strand at 3153.436 kb on - strand at 3153.436 kb on - strand at 3153.436 kb on - strand at 3153.436 kb on - strand at 3153.452 kb on + strand at 3153.452 kb on + strand at 3153.452 kb on + strand at 3153.469 kb on - strand at 3153.540 kb on + strand at 3153.544 kb on - strand at 3153.548 kb on - strand at 3153.555 kb on + strand at 3153.555 kb on + strand at 3153.555 kb on + strand at 3153.562 kb on + strand at 3153.568 kb on - strand at 3153.572 kb on + strand at 3153.580 kb on - strand at 3153.778 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,151,390 + BWI76_RS15055 0.19 -0.8 3,151,462 + BWI76_RS15055 0.30 -0.1 3,151,577 - BWI76_RS15055 0.49 +0.4 3,151,596 + BWI76_RS15055 0.52 +0.3 3,151,604 - BWI76_RS15055 0.53 -0.6 3,151,627 - BWI76_RS15055 0.57 +0.3 3,151,662 - BWI76_RS15055 0.62 -0.2 3,151,671 - BWI76_RS15055 0.64 +1.0 3,151,673 + BWI76_RS15055 0.64 -1.4 3,151,680 + BWI76_RS15055 0.65 -1.5 3,151,680 + BWI76_RS15055 0.65 +0.5 3,151,681 - BWI76_RS15055 0.65 +0.0 3,151,682 - BWI76_RS15055 0.66 -1.9 3,151,682 - BWI76_RS15055 0.66 +0.5 3,151,688 - BWI76_RS15055 0.67 -0.0 3,151,688 - BWI76_RS15055 0.67 -0.0 3,151,701 - BWI76_RS15055 0.69 +1.4 3,151,708 - BWI76_RS15055 0.70 -0.2 3,151,708 - BWI76_RS15055 0.70 -0.6 3,151,712 + BWI76_RS15055 0.70 -0.5 3,151,727 - BWI76_RS15055 0.73 -0.4 3,151,746 + -0.9 3,151,761 - BWI76_RS15055 0.78 -1.0 3,151,822 + BWI76_RS15055 0.88 +3.9 3,151,843 - +0.3 3,151,848 - -0.9 3,151,871 - +0.1 3,151,951 + -2.4 3,151,951 + +0.5 3,151,951 + -1.3 3,151,951 + -2.2 3,151,951 + +0.9 3,151,959 - -0.4 3,151,959 - -0.2 3,151,959 - +0.2 3,151,990 - -1.6 3,152,129 + +0.0 3,152,438 - BWI76_RS15060 0.23 +0.3 3,152,442 - BWI76_RS15060 0.23 -2.6 3,152,457 - BWI76_RS15060 0.27 +0.9 3,152,495 - BWI76_RS15060 0.34 -1.0 3,152,695 - BWI76_RS15060 0.74 +0.1 3,152,729 - BWI76_RS15060 0.81 -1.6 3,153,179 - BWI76_RS15065 0.62 +0.3 3,153,293 - -1.1 3,153,293 - +0.2 3,153,414 - -0.2 3,153,428 + -0.5 3,153,428 + +1.2 3,153,436 - +2.5 3,153,436 - +1.5 3,153,436 - -1.5 3,153,436 - +1.8 3,153,436 - -3.2 3,153,436 - +1.3 3,153,452 + +1.1 3,153,452 + -1.9 3,153,452 + +0.7 3,153,469 - -1.1 3,153,540 + -0.5 3,153,544 - +1.9 3,153,548 - -0.7 3,153,555 + +1.7 3,153,555 + +0.7 3,153,555 + -0.6 3,153,562 + -0.8 3,153,568 - -0.3 3,153,572 + +1.9 3,153,580 - +0.6 3,153,778 - -0.6
Or see this region's nucleotide sequence