Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14910 and BWI76_RS14915 are separated by 890 nucleotides BWI76_RS14915 and BWI76_RS14920 are separated by 427 nucleotides
BWI76_RS14910: BWI76_RS14910 - phosphoporin PhoE, at 3,124,493 to 3,125,578
_RS14910
BWI76_RS14915: BWI76_RS14915 - hypothetical protein, at 3,126,469 to 3,126,975
_RS14915
BWI76_RS14920: BWI76_RS14920 - ABC transporter permease, at 3,127,403 to 3,128,410
_RS14920
Position (kb)
3126
3127 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3125.509 kb on + strand at 3125.509 kb on - strand at 3125.509 kb on - strand at 3125.509 kb on - strand at 3125.509 kb on - strand at 3125.517 kb on - strand at 3125.517 kb on - strand at 3125.517 kb on - strand at 3125.524 kb on + strand at 3125.550 kb on - strand at 3125.550 kb on - strand at 3125.550 kb on - strand at 3125.550 kb on - strand at 3125.550 kb on - strand at 3125.550 kb on - strand at 3125.550 kb on - strand at 3125.550 kb on - strand at 3125.632 kb on - strand at 3125.632 kb on - strand at 3125.632 kb on - strand at 3125.636 kb on + strand at 3125.644 kb on - strand at 3125.644 kb on - strand at 3125.788 kb on - strand at 3126.058 kb on + strand at 3126.101 kb on + strand at 3126.104 kb on + strand at 3126.134 kb on + strand at 3126.155 kb on + strand at 3126.166 kb on + strand at 3126.166 kb on + strand at 3126.173 kb on + strand at 3126.173 kb on + strand at 3126.173 kb on + strand at 3126.190 kb on + strand at 3126.201 kb on + strand at 3126.229 kb on + strand at 3126.239 kb on + strand at 3126.244 kb on + strand at 3126.247 kb on + strand at 3126.255 kb on - strand at 3126.271 kb on + strand at 3126.271 kb on + strand at 3126.279 kb on - strand at 3126.279 kb on - strand at 3126.279 kb on - strand at 3126.279 kb on - strand at 3126.332 kb on + strand at 3126.334 kb on - strand at 3126.337 kb on + strand at 3126.337 kb on + strand at 3126.342 kb on + strand at 3126.344 kb on + strand at 3126.351 kb on + strand at 3126.352 kb on - strand at 3126.367 kb on + strand at 3126.456 kb on - strand at 3126.456 kb on - strand at 3126.583 kb on + strand, within BWI76_RS14915 at 3126.591 kb on - strand at 3126.615 kb on - strand, within BWI76_RS14915 at 3126.711 kb on - strand at 3126.713 kb on - strand, within BWI76_RS14915 at 3126.877 kb on - strand, within BWI76_RS14915 at 3126.882 kb on - strand, within BWI76_RS14915 at 3126.891 kb on - strand, within BWI76_RS14915 at 3126.983 kb on - strand at 3126.994 kb on - strand at 3127.086 kb on + strand at 3127.153 kb on - strand at 3127.155 kb on + strand at 3127.368 kb on + strand at 3127.376 kb on - strand at 3127.401 kb on + strand at 3127.426 kb on + strand at 3127.541 kb on - strand, within BWI76_RS14920 at 3127.616 kb on + strand, within BWI76_RS14920 at 3127.710 kb on - strand, within BWI76_RS14920 at 3127.763 kb on + strand, within BWI76_RS14920 at 3127.771 kb on - strand, within BWI76_RS14920 at 3127.777 kb on - strand, within BWI76_RS14920 at 3127.856 kb on + strand, within BWI76_RS14920
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,125,509 + +1.2 3,125,509 - +0.9 3,125,509 - -0.4 3,125,509 - -0.8 3,125,509 - -0.4 3,125,517 - +0.6 3,125,517 - -3.2 3,125,517 - +1.0 3,125,524 + -1.1 3,125,550 - +1.8 3,125,550 - -1.7 3,125,550 - -0.2 3,125,550 - -0.3 3,125,550 - +0.5 3,125,550 - -2.6 3,125,550 - +0.1 3,125,550 - +0.5 3,125,632 - -0.5 3,125,632 - +0.9 3,125,632 - +2.8 3,125,636 + -0.2 3,125,644 - -0.4 3,125,644 - +0.3 3,125,788 - -1.9 3,126,058 + -0.5 3,126,101 + +0.3 3,126,104 + -0.1 3,126,134 + -0.0 3,126,155 + +0.2 3,126,166 + +0.2 3,126,166 + +1.3 3,126,173 + +0.3 3,126,173 + -2.9 3,126,173 + -0.5 3,126,190 + +0.5 3,126,201 + -0.3 3,126,229 + +2.2 3,126,239 + +0.8 3,126,244 + -0.4 3,126,247 + +0.2 3,126,255 - +1.3 3,126,271 + -0.9 3,126,271 + +0.4 3,126,279 - +0.1 3,126,279 - +0.1 3,126,279 - -0.2 3,126,279 - -0.2 3,126,332 + +0.5 3,126,334 - +2.2 3,126,337 + +0.6 3,126,337 + -1.0 3,126,342 + -0.2 3,126,344 + -0.6 3,126,351 + -1.0 3,126,352 - +0.8 3,126,367 + -0.3 3,126,456 - -0.1 3,126,456 - -0.1 3,126,583 + BWI76_RS14915 0.22 -0.1 3,126,591 - +1.8 3,126,615 - BWI76_RS14915 0.29 -1.5 3,126,711 - +0.8 3,126,713 - BWI76_RS14915 0.48 -2.1 3,126,877 - BWI76_RS14915 0.80 -1.6 3,126,882 - BWI76_RS14915 0.81 -1.2 3,126,891 - BWI76_RS14915 0.83 +0.2 3,126,983 - -0.4 3,126,994 - -1.3 3,127,086 + -0.8 3,127,153 - -0.5 3,127,155 + +1.1 3,127,368 + +0.7 3,127,376 - -1.5 3,127,401 + +1.0 3,127,426 + +0.1 3,127,541 - BWI76_RS14920 0.14 +0.1 3,127,616 + BWI76_RS14920 0.21 +1.6 3,127,710 - BWI76_RS14920 0.30 +1.1 3,127,763 + BWI76_RS14920 0.36 -0.6 3,127,771 - BWI76_RS14920 0.37 -0.0 3,127,777 - BWI76_RS14920 0.37 -0.0 3,127,856 + BWI76_RS14920 0.45 +0.6
Or see this region's nucleotide sequence