Experiment: L-aspartic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14760 and BWI76_RS14765 overlap by 4 nucleotides BWI76_RS14765 and BWI76_RS14770 are separated by 25 nucleotides BWI76_RS14770 and BWI76_RS14775 overlap by 8 nucleotides BWI76_RS14775 and BWI76_RS14780 are separated by 9 nucleotides
BWI76_RS14760: BWI76_RS14760 - PTS ascorbate transporter subunit IIC, at 3,096,711 to 3,098,021
_RS14760
BWI76_RS14765: BWI76_RS14765 - PTS lactose/cellobiose transporter subunit IIB, at 3,098,018 to 3,098,305
_RS14765
BWI76_RS14770: BWI76_RS14770 - PTS IIA 2 domain protein, at 3,098,331 to 3,098,774
_RS14770
BWI76_RS14775: BWI76_RS14775 - creatinine amidohydrolase, at 3,098,767 to 3,099,507
_RS14775
BWI76_RS14780: BWI76_RS14780 - phosphotriesterase, at 3,099,517 to 3,100,488
_RS14780
Position (kb)
3098
3099 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3097.387 kb on - strand, within BWI76_RS14760 at 3097.568 kb on - strand, within BWI76_RS14760 at 3097.595 kb on + strand, within BWI76_RS14760 at 3097.723 kb on - strand, within BWI76_RS14760 at 3097.780 kb on - strand, within BWI76_RS14760 at 3097.816 kb on + strand, within BWI76_RS14760 at 3097.877 kb on - strand, within BWI76_RS14760 at 3097.943 kb on - strand at 3098.043 kb on + strand at 3098.104 kb on + strand, within BWI76_RS14765 at 3098.169 kb on - strand, within BWI76_RS14765 at 3098.218 kb on - strand, within BWI76_RS14765 at 3098.449 kb on - strand, within BWI76_RS14770 at 3098.731 kb on - strand at 3098.906 kb on + strand, within BWI76_RS14775 at 3099.126 kb on + strand at 3099.191 kb on + strand, within BWI76_RS14775 at 3099.743 kb on + strand, within BWI76_RS14780
Per-strain Table
Position Strand Gene LocusTag Fraction L-aspartic (N) remove 3,097,387 - BWI76_RS14760 0.52 -0.8 3,097,568 - BWI76_RS14760 0.65 +1.1 3,097,595 + BWI76_RS14760 0.67 +0.6 3,097,723 - BWI76_RS14760 0.77 -1.9 3,097,780 - BWI76_RS14760 0.82 +0.4 3,097,816 + BWI76_RS14760 0.84 +0.7 3,097,877 - BWI76_RS14760 0.89 +0.1 3,097,943 - -0.8 3,098,043 + -0.4 3,098,104 + BWI76_RS14765 0.30 -0.0 3,098,169 - BWI76_RS14765 0.52 -0.5 3,098,218 - BWI76_RS14765 0.69 +0.1 3,098,449 - BWI76_RS14770 0.27 -1.3 3,098,731 - +0.1 3,098,906 + BWI76_RS14775 0.19 -2.1 3,099,126 + +2.8 3,099,191 + BWI76_RS14775 0.57 +0.4 3,099,743 + BWI76_RS14780 0.23 +0.4
Or see this region's nucleotide sequence