Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14770

Experiment: L-aspartic (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14760 and BWI76_RS14765 overlap by 4 nucleotidesBWI76_RS14765 and BWI76_RS14770 are separated by 25 nucleotidesBWI76_RS14770 and BWI76_RS14775 overlap by 8 nucleotidesBWI76_RS14775 and BWI76_RS14780 are separated by 9 nucleotides BWI76_RS14760: BWI76_RS14760 - PTS ascorbate transporter subunit IIC, at 3,096,711 to 3,098,021 _RS14760 BWI76_RS14765: BWI76_RS14765 - PTS lactose/cellobiose transporter subunit IIB, at 3,098,018 to 3,098,305 _RS14765 BWI76_RS14770: BWI76_RS14770 - PTS IIA 2 domain protein, at 3,098,331 to 3,098,774 _RS14770 BWI76_RS14775: BWI76_RS14775 - creatinine amidohydrolase, at 3,098,767 to 3,099,507 _RS14775 BWI76_RS14780: BWI76_RS14780 - phosphotriesterase, at 3,099,517 to 3,100,488 _RS14780 Position (kb) 3098 3099Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3097.387 kb on - strand, within BWI76_RS14760at 3097.568 kb on - strand, within BWI76_RS14760at 3097.595 kb on + strand, within BWI76_RS14760at 3097.723 kb on - strand, within BWI76_RS14760at 3097.780 kb on - strand, within BWI76_RS14760at 3097.816 kb on + strand, within BWI76_RS14760at 3097.877 kb on - strand, within BWI76_RS14760at 3097.943 kb on - strandat 3098.043 kb on + strandat 3098.104 kb on + strand, within BWI76_RS14765at 3098.169 kb on - strand, within BWI76_RS14765at 3098.218 kb on - strand, within BWI76_RS14765at 3098.449 kb on - strand, within BWI76_RS14770at 3098.731 kb on - strandat 3098.906 kb on + strand, within BWI76_RS14775at 3099.126 kb on + strandat 3099.191 kb on + strand, within BWI76_RS14775at 3099.743 kb on + strand, within BWI76_RS14780

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Per-strain Table

Position Strand Gene LocusTag Fraction L-aspartic (N)
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3,097,387 - BWI76_RS14760 0.52 -0.8
3,097,568 - BWI76_RS14760 0.65 +1.1
3,097,595 + BWI76_RS14760 0.67 +0.6
3,097,723 - BWI76_RS14760 0.77 -1.9
3,097,780 - BWI76_RS14760 0.82 +0.4
3,097,816 + BWI76_RS14760 0.84 +0.7
3,097,877 - BWI76_RS14760 0.89 +0.1
3,097,943 - -0.8
3,098,043 + -0.4
3,098,104 + BWI76_RS14765 0.30 -0.0
3,098,169 - BWI76_RS14765 0.52 -0.5
3,098,218 - BWI76_RS14765 0.69 +0.1
3,098,449 - BWI76_RS14770 0.27 -1.3
3,098,731 - +0.1
3,098,906 + BWI76_RS14775 0.19 -2.1
3,099,126 + +2.8
3,099,191 + BWI76_RS14775 0.57 +0.4
3,099,743 + BWI76_RS14780 0.23 +0.4

Or see this region's nucleotide sequence